ncRNA ID | novel_gar_miR891 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:92812962-92813055 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGAAAGCUCUUGAAUAUUCGGUC - 24 |
Stem-loop(if miRNA) |
--- AA U C UCACUUGG A -AAG UA GAGA GCUC UGAAUAUU GG GGAAG AAAUUG G A |||| |||| |||||||| || ||||| |||||| | CUCU UGAG ACUUGUAG UC UCUUC UUUGAU C G UUC -- U U ------UA G GGUA UU |
Stem-loop sequence | GAGAAAGCUCUUGAAUAUUCGGUCACUUGGGGAAGAAAAUUGAAGGUAAGUUCAUGGUAGUUUGCUUCUAUCUUGAUGUUCAUGAGUUCUCCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017788392.1 |
|
3.0 | PREDICTED: Gossypium arboreum dolichol kinase EVAN-like (LOC108484565), mRNA | dolichol kinase EVAN-like(LOC108484565) | coding protein | psRNATarget |