ncRNA ID | novel_gar_miR889 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:88619660-88619769 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 87 - AGGAAAUGGGUGAAUUAAGGGCAA - 110 |
Stem-loop(if miRNA) |
--A        - U     -     C   A     AA   UU  AAAUUAA   AAU    GGAAAUGG G GAAUU AAGGG AAA UUGGA  AUU  CA       CUA   A    |||||||| | ||||| ||||| ||| |||||  |||  ||       |||    CUUUUACU C CUUAA UUCUC UUU GAUCU  UAA  GU       GGU   A CUA        U U     C     -   A     -A   GG  AAACCAG   AAA |
Stem-loop sequence | AGGAAAUGGGUGAAUUAAGGGCAAAAUUGGAAAAUUUUCAAAAUUAACUAAAUAAAAAUGGGACCAAAUGGGAAUAUCUAGAUUUCUCUUCAAUUCUCUUCAUUUUCAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784963.1 |
|
2.0 | PREDICTED: Gossypium arboreum (+)-delta-cadinene synthase isozyme A-like (LOC108481896), mRNA | (+)-delta-cadinene synthase isozyme A-like(LOC108481896) | coding protein | psRNATarget |