| ncRNA ID | novel_gar_miR882 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr6:108808759-108808878 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR3180715;SRR3180719;SRR3180720;SRR1029586 |
| Length | 20 |
| Mature sequence(if miRNA) | 101 - CUCAAGAAAGCUGUGGGAAA - 120 |
| Stem-loop(if miRNA) |
-- A --G ACUCUCUCU - CUCUGCAUGCCUUCUCUUCUCUAUU UUCCACAGCUUUCUUGA CUU GCU G G C ||||||||||||||||| ||| ||| | | AGGGUGUCGAAAGAACU GAA UAG G G C AA C GUA --------- U ACUGACUCCUAAUUACGAAGGUCAU |
| Stem-loop sequence | UUCCACAGCUUUCUUGAACUUGGCUACUCUCUCUGGCUCUGCAUGCCUUCUCUUCUCUAUUCCUACUGGAAGCAUUAAUCCUCAGUCAGUGGAUAUGAAGCUCAAGAAAGCUGUGGGAAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017758168.1 |
|
3.0 | PREDICTED: Gossypium arboreum G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 (LOC108458771), mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1(LOC108458771) | coding protein | psRNATarget | |||||||||
| XM_017757560.1 |
|
3.0 | PREDICTED: Gossypium arboreum G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 (LOC108458244), mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1(LOC108458244) | coding protein | psRNATarget |