ncRNA ID | novel_gar_miR877 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:94223750-94223885 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCUGACCUGUUAAUGGCUGGCACC - 24 |
Stem-loop(if miRNA) |
--U   A  U      -   UG      CC     AUGA          AAAAAA             GUG    CUG CC GUUAAU GGC  GCACCA  AGAGU    GUUUUUUUUU      AUUUGGUGCUGGC   C    ||| || |||||| |||  ||||||  |||||    ||||||||||      |||||||||||||   C    GGC GG UAAUUG CCG  CGUGGU  UUUUA    UAAAAAAAAA      UGAACCACGGCCG   A CAC   C  -      U   GU      UU     --AA          ---ACA             GUA |
Stem-loop sequence | UCUGACCUGUUAAUGGCUGGCACCACCAGAGUAUGAGUUUUUUUUUAAAAAAAUUUGGUGCUGGCGUGCCAAUGGCCGGCACCAAGUACAAAAAAAAAAUAAAUUUUUUUGGUGCUGGCCUGUUAAUGGCCGGCAC |