ncRNA ID | novel_gar_miR874 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:49636738-49636942 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 182 - ACAUGACUGGAGACAUGGCCGUGU - 205 |
Stem-loop(if miRNA) |
--        -  AG     G      G  -UCAA      GGAGG         A U   C AG     ACC UG         CCUUA    GU GC      - - G   ACAUGACU GG  ACAUG CCGUGU CC     CCGUGU     ACACGGCCU G ACA G  CGUGU   U  GUCGUGUGC     AAGG  U  UGAUGU C A A   |||||||| ||  ||||| |||||| ||     ||||||     ||||||||| | ||| |  |||||   |  |||||||||     ||||  |  |||||| | |   UGUGCUGA CC  UGUAC GGUACA GG     GGCACA     UGUGCCGGA C UGU C  GCACA   A  CGGCACAUG     UUUC  G  ACUGUA G U A AG        A  -G     G      -  UACUG      GGGGG         A -   A GA     --A GU         -----    UG -A      A A A |
Stem-loop sequence | ACAUGACUGGAGACAUGGCCGUGUGCCUCAACCGUGUGGAGGACACGGCCUAGUACACGAGCGUGUACCUUGGUCGUGUGCCCUUAAAGGGUUGCUGAUGUCAGAAAUAGAAUGUCAAGGUCUUUGUACACGGCUGAAACACGAGCAUGUCAAGGCCGUGUGGGGGACACGGGUCAUGGACAUGGGCAUGUGCCAAGUCGUGUGA |