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BaseInfo

ncRNA ID	novel_gar_miR871
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr5:59204013-59204069 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588
Length	24
Mature sequence(if miRNA)	34 - ACACCGUGUGUAGAACAUAGGCAU - 57
Stem-loop(if miRNA)	--AC           A      G -   U     ACCGUGUGUAG ACAUAG C AUG G     ||||||||||| |||||| | |||     UGGCACACAUC UGUGUC G UGC A AAUC           G      G A   U
Stem-loop sequence	ACACCGUGUGUAGAACAUAGGCAUGUGAUCGUAGGCUGUGUGCUACACACGGUCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017793403.1	ncRNA:24   UA---CGGAUACAAGAUGUGUGCCACA   1   ||---|==||*|*|||||||||||||* targets:2544   AUUCAGUUUACGAUCUACACACGGUGG   2570 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108489112 (LOC108489112), transcript variant X3, mRNA	uncharacterized LOC108489112(LOC108489112)	coding protein	psRNATarget
XM_017793402.1	ncRNA:24   UA---CGGAUACAAGAUGUGUGCCACA   1   ||---|==||*|*|||||||||||||* targets:2543   AUUCAGUUUACGAUCUACACACGGUGG   2569 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108489112 (LOC108489112), transcript variant X2, mRNA	uncharacterized LOC108489112(LOC108489112)	coding protein	psRNATarget
XM_017793401.1	ncRNA:24   UA---CGGAUACAAGAUGUGUGCCACA   1   ||---|==||*|*|||||||||||||* targets:2544   AUUCAGUUUACGAUCUACACACGGUGG   2570 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum uncharacterized LOC108489112 (LOC108489112), transcript variant X1, mRNA	uncharacterized LOC108489112(LOC108489112)	coding protein	psRNATarget