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BaseInfo

ncRNA ID	novel_gar_miR862
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr10:82176783-82176891 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588
Length	24
Mature sequence(if miRNA)	86 - AUGCUGUUACUGACGCAUUUGCUC - 109
Stem-loop(if miRNA)	--C           UG   GA     ---GCAAA      -      -   AUUUUA    UAAAUGUGUUA  AAU  UAUAU        AAUGAG GAUGAU UCC      A    |||||||||||  |||  |||||        |||||| |||||| |||    GUUUACGCAGU  UUG  GUAUA        UUGCUC CUGCUA GGG      C CUC           CA   UC     AUUACUUG      A      U   AUUUAA
Stem-loop sequence	CUAAAUGUGUUAUGAAUGAUAUAUGCAAAAAUGAGGAUGAUUCCAUUUUAACAAUUUAGGGUAUCGUCACUCGUUGUUCAUUAAUAUGCUGUUACUGACGCAUUUGCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017752577.1	ncRNA:24   CUCG----------UUUACGCAGUCAUUGUCGUA   1   ||||----------=|||||||||||=||||||* targets:663   GAGCUUCUUGAAAAGAAUGCGUCAGUGACAGCAG   696 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum ribonuclease II, chloroplastic/mitochondrial (LOC108454199), transcript variant X2, mRNA	ribonuclease II, chloroplastic/mitochondrial(LOC108454199)	coding protein	psRNATarget
XM_017752576.1	ncRNA:24   CUCG----------UUUACGCAGUCAUUGUCGUA   1   ||||----------=|||||||||||=||||||* targets:663   GAGCUUCUUGAAAAGAAUGCGUCAGUGACAGCAG   696 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum ribonuclease II, chloroplastic/mitochondrial (LOC108454199), transcript variant X1, mRNA	ribonuclease II, chloroplastic/mitochondrial(LOC108454199)	coding protein	psRNATarget