ncRNA ID | novel_gar_miR861 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:19660984-19661033 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 27 - CGUGUCUCAGGUUGUGUGGGCAUU - 50 |
Stem-loop(if miRNA) |
--  A         -A        AC   UG CUUACACAG  UGAGACAC  G   || |||||||||  ||||||||   AC GGGUGUGUU  ACUCUGUG  C UU  -         GG        CU |
Stem-loop sequence | UGACUUACACAGAUGAGACACACGCUCGUGUCUCAGGUUGUGUGGGCAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017786198.1 |
|
2.0 | PREDICTED: Gossypium arboreum epidermal growth factor receptor substrate 15 (LOC108483024), mRNA | epidermal growth factor receptor substrate 15(LOC108483024) | coding protein | psRNATarget |