ncRNA ID | novel_gar_miR858 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:5903552-5903742 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGACCGCUGUUAGGGAGGUAACA - 24 |
Stem-loop(if miRNA) |
--              UUA      C               A    C              U      AUU   UGG   GAAAAUA     UU       U   UUACUUUCCUGACG   GUCCUA GUGGUAGUCCAAAUG AUUU UAAAUGCCAACUUG AUGUCU   UGC   GAU       AGUUU  AAUUAAA A   ||||||||||||||   |||||| ||||||||||||||| |||| |||||||||||||| ||||||   |||   |||       |||||  |||||||   AAUGGAGGGAUUGU   CAGGAU CACCAUCAGGUUUAC UAAA AUUUACGGUUGAAU UACAGG   AUG   CUA       UCAGG  UUAAUUU A AC              CGC      A               C    -              C      ---   -UA   -------     -U       A |
Stem-loop sequence | UUACUUUCCUGACGUUAGUCCUACGUGGUAGUCCAAAUGAAUUUCUAAAUGCCAACUUGUAUGUCUAUUUGCUGGGAUGAAAAUAAGUUUUUAAUUAAAUAAAUUUAAUUUGGACUAUCAUGUAGGACAUCUAAGUUGGCAUUUAAAAUCCAUUUGGACUACCACAUAGGACCGCUGUUAGGGAGGUAACA |