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BaseInfo

ncRNA ID novel_gar_miR856
Species Gossypium arboreum
Class miRNA
Genome position Chr5:7442992-7443178 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 164 - AAUAAGCAGAUUGGUUAAUUCUGU - 187
Stem-loop(if miRNA) --AAUA             A  C   G     A                        C  -C    GC  A     CAAC   ACAA   C     AC
      AGCAGAUUGGUUA UU UGU AAAAA UUCAUUCAUUUUUACUGUUAAAAA UA  CGUA  UG CAAAA    UGG    UUA AUGUG  A
      ||||||||||||| || ||| ||||| |||||||||||||||||||||||| ||  ||||  || |||||    |||    ||| |||||
      UCGUUUGACUAGU AA ACA UUUUU AAGUAGGUAAAGAUGACAAUUUUU AU  GUAU  AC GUUUU    ACU    AAU UACAC  U
AGUUUC             A  A   A     A                        A  AA    AU  -     ----   ---C   A     CG
Stem-loop sequence AAUAAGCAGAUUGGUUAAUUCUGUGAAAAAAUUCAUUCAUUUUUACUGUUAAAAACUACCGUAGCUGACAAAACAACUGGACAAUUACAUGUGACAUGCCACAUAUAACUCAUUUUGCAUAUAUGAAUAAUUUUUAACAGUAGAAAUGGAUGAAAUUUUUAACAAAAAUGAUCAGUUUGCUCUUUGA