| ncRNA ID | novel_gar_miR853 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr5:24912769-24912877 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR1029586 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUGCUGUUACUGACGCAUUUGCUU - 24 |
| Stem-loop(if miRNA) |
--C UG A ---GCAAA - UUC C UAAAUGUGUUA GAUA UAUAU AAUGAG GAUGA UAUUUUAA A ||||||||||| |||| ||||| |||||| ||||| |||||||| GUUUACGCAGU UUGU GUAUA UUGCUC CUGCU AUGGGAUU A UUC CA C AUUACUCG A --- U |
| Stem-loop sequence | CUAAAUGUGUUAUGGAUAAUAUAUGCAAAAAUGAGGAUGAUUCUAUUUUAACAAUUUAGGGUAUCGUCACUCGUUGCUCAUUAAUAUGCUGUUACUGACGCAUUUGCUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017752577.1 |
|
2.5 | PREDICTED: Gossypium arboreum ribonuclease II, chloroplastic/mitochondrial (LOC108454199), transcript variant X2, mRNA | ribonuclease II, chloroplastic/mitochondrial(LOC108454199) | coding protein | psRNATarget | |||||||||
| XM_017752576.1 |
|
2.5 | PREDICTED: Gossypium arboreum ribonuclease II, chloroplastic/mitochondrial (LOC108454199), transcript variant X1, mRNA | ribonuclease II, chloroplastic/mitochondrial(LOC108454199) | coding protein | psRNATarget |