| ncRNA ID | novel_gar_miR846 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr4:66367290-66367503 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588 |
| Length | 24 |
| Mature sequence(if miRNA) | 191 - AGGGAGGUAAUGAAGCUUAACGGU - 214 |
| Stem-loop(if miRNA) |
-- C C A A A AUCAACUUGAA UU G UGAAAAUAGAUUUUUAAUUAAAU CGUUAAGCU UAUUAUCUCUCUAACGGUAGUCUUA GUGACA UCCAAAUG GUUUU AAU UGUUUAGUUG GG A A ||||||||| ||||||||||||||||||||||||| |||||| |||||||| ||||| ||| |||||||||| || | GCAAUUCGA GUAAUGGAGGGAUUGCUAUCAGGAU CACUGU AGGUUUAC CAAAA UUA AAUUGAACCU CA G A UG A U C C C ----------C -A - GAUGCACUGCCAGGUUUAAUUUA |
| Stem-loop sequence | CGUUAAGCUCUAUUAUCUCUCUAACGGUAGUCUUACGUGACAAUCCAAAUGAGUUUUAAAUAUCAACUUGAAUGUUUAGUUGUUGGGAUGAAAAUAGAUUUUUAAUUAAAUAAAUUUAAUUUGGACCGUCACGUAGGACAUCCAAGUUAACAUUCAAAACCCAUUUGGACUGUCACUUAGGACUAUCGUUAGGGAGGUAAUGAAGCUUAACGGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017782881.1 |
|
2.0 | PREDICTED: Gossypium arboreum putative pentatricopeptide repeat-containing protein At2g02150 (LOC108479994), transcript variant X2, mRNA | putative pentatricopeptide repeat-containing protein At2g02150(LOC108479994) | coding protein | psRNATarget | |||||||||
| XM_017782880.1 |
|
2.0 | PREDICTED: Gossypium arboreum putative pentatricopeptide repeat-containing protein At2g02150 (LOC108479994), transcript variant X1, mRNA | putative pentatricopeptide repeat-containing protein At2g02150(LOC108479994) | coding protein | psRNATarget |