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BaseInfo

ncRNA ID ath-miRf11024-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUAUGGUCAGUUUUUGGACA - NA
Stem-loop(if miRNA)                                AU      UA   CC
AUCCAUUUAGUUAUGGUCAGUUUUUGGACAA  CCAAAA  AAC  U
|||||||||||||||||||||||||||||||  ||||||  |||
UAGGUAAAUUAAUACUAGUCAAAAAUCUGUU  GGUUUU  UUG  U
                               CG      --   AC
Stem-loop sequence AUCCAUUUAGUUAUGGUCAGUUUUUGGACAAAUCCAAAAUAAACCCUUCAGUUUUUUGGGCUUGUCUAAAAACUGAUCAUAAUUAAAUGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001203896.1
ncRNA:20   ACAGGUUUUUGACUGGUAUU   1
  |||||||||||||||||*||
targets:3006   UGUCCAAAAACUGACCAAAA   3025

1.5 Arabidopsis thaliana pesticidal crystal cry8Ba protein mRNA pesticidal crystal cry8Ba protein(AT4G24610) coding protein psRNATarget
NM_001341688.1
ncRNA:20   ACAGGUUUUUGACUGGUAUU   1
  |||||||||||||||||*||
targets:3055   UGUCCAAAAACUGACCAAAA   3074

1.5 Arabidopsis thaliana pesticidal crystal cry8Ba protein mRNA pesticidal crystal cry8Ba protein(AT4G24610) coding protein psRNATarget
NM_118594.4
ncRNA:20   ACAGGUUUUUGACUGGUAUU   1
  |||||||||||||||||*||
targets:3306   UGUCCAAAAACUGACCAAAA   3325

1.5 Arabidopsis thaliana pesticidal crystal cry8Ba protein mRNA pesticidal crystal cry8Ba protein(AT4G24610) coding protein psRNATarget
NM_001341687.1
ncRNA:20   ACAGGUUUUUGACUGGUAUU   1
  |||||||||||||||||*||
targets:3318   UGUCCAAAAACUGACCAAAA   3337

1.5 Arabidopsis thaliana pesticidal crystal cry8Ba protein mRNA pesticidal crystal cry8Ba protein(AT4G24610) coding protein psRNATarget