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BaseInfo

ncRNA ID novel_gar_miR823
Species Gossypium arboreum
Class miRNA
Genome position Chr4:56148355-56148436 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 22
Mature sequence(if miRNA) 61 - GAUGUCGCAGGAGGGUUGACAC - 82
Stem-loop(if miRNA) --    U           U       C  -------AUUUA   C
  GAUG CGCAGGAGGGU GACACUG CA            AGC A
  |||| ||||||||||| ||||||| ||            |||
  UUAC GCGUCUUCCUA CUGUGAC GU            UCG U
UA    U           -       U  CACUCCCAUUUA   U
Stem-loop sequence GAUGUCGCAGGAGGGUUGACACUGCCAAUUUAAGCCAUUGCUAUUUACCCUCACUGUCAGUGUCAUCCUUCUGCGUCAUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768628.1
ncRNA:22   CACAGUUGGGAGGACGCUGUAG   1
  |***=||||||||||||||||=
targets:23   GAUAUAACCCUCCUGCGACAUU   44

3.0 PREDICTED: Gossypium arboreum cyclin-B1-2-like (LOC108467832), mRNA cyclin-B1-2-like(LOC108467832) coding protein psRNATarget