ncRNA ID | novel_gar_miR823 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:56148355-56148436 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 22 |
Mature sequence(if miRNA) | 61 - GAUGUCGCAGGAGGGUUGACAC - 82 |
Stem-loop(if miRNA) |
--    U           U       C  -------AUUUA   C   GAUG CGCAGGAGGGU GACACUG CA            AGC A   |||| ||||||||||| ||||||| ||            |||   UUAC GCGUCUUCCUA CUGUGAC GU            UCG U UA    U           -       U  CACUCCCAUUUA   U |
Stem-loop sequence | GAUGUCGCAGGAGGGUUGACACUGCCAAUUUAAGCCAUUGCUAUUUACCCUCACUGUCAGUGUCAUCCUUCUGCGUCAUUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017768628.1 |
|
3.0 | PREDICTED: Gossypium arboreum cyclin-B1-2-like (LOC108467832), mRNA | cyclin-B1-2-like(LOC108467832) | coding protein | psRNATarget |