Search result

BaseInfo

ncRNA ID ath_circ_030252
Species Arabidopsis thaliana
Class circRNA
Genome position 5:26715880-26719170[-/-]
Reference genome TAIR10
Source PlantcircBase
Method find_circ/NA
Type exonic
Splice junction sequence CCGTAGAGATAGACAATAAAGAGGCATTAATAGTATTCAAACACCAGTCTGGAAATGTATTCTCTAGTATCTCCAGATTTAGTCTTTTTCTTTCTAAGTTATGAAGCTTGGCAATGCATAGTCTAATGAGGAGATATTAAGAACTAAAGCCTCAACATTGGGGCAATCCATTTCCAACCATTTCGATGAGAACAAATCAT
Tissues leaf/root, leaf, aerial, inflorescences, whole_plant
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CCGTAGAGATAGACAATAAAGAGGCATTAATAGTATTCAAACACCAGTCTGGAAATGTATTCTCTAGTATCTCCAGATTTAGTCTTTTTCTTTCTAAGTTTTCCTTAAATTCGCTTTGACAGATAGCCAACTCCCTAAGGATATCATGTTGAGTCACTAAGAAGTCATTGTAGAAACCGTCTTCGTGCTCATTTGTGCTGATAAAGAAATAAATAAGTTCCACTAATGGTAGATGGCAAGAAGGTGCAAAGATATAGATTTGAAACATAAATAACATACCCGAGAGGAACAAGTTTAAGTAGATTCTGGGAGGCAAGGTCTTCAAGGTACATATACAAGATACTACTACCTTTACCGTATAATTCCACCCACATATCAATTATTACCGAAGCACGTATCTTTTGGTCCTCAAGAAATGAGCCCATGTCCAAAAAGCACTCCTTAAGGTTGGGATCCAGAGCATCAAAACTAGGCTGCAAACATTCTAGCACAGTTGGATAAGGCTTACCAAGAATTTTTTCCCCTTCAGACCAGCTTTCCACCTGACCTTTCCATGTATTTAGAGATCGTCCTTTGAGTGAAACACCCACTACTTCAATTACGATTGGGAATCCATTGCAACGTTTCAATATCTGCAATACTCACCATGTGAAAAAAGAAAAAGATGAATCTATTGATATAGTTACAGATTTCGTAGATCACAAATGTATAGAGGTTCATCTAGATGAATGAAACAACAACCTTCTGGAGGAGATCTTCGTACTCATCAGGAGACGTGTTACAAGGTCGCGATGCCCAATGAATGAGAAGGGCTCTAGCATCATCATCTTCCAAAGGTTTCAAACGATAATTGGAATCAAAACTCGGAAAGTCAAACCGAGAAGTCACCAAAATCTTATAATTTGGTAACTTAATTTGAAATTTCTGAAGGAAAGAATCCGCTCCCCGCCACACATCATCCAACACCAACAATATAGGACCATTTTCTTTAAGTTCCTCCAGCAGTTTTCTTAAGCCAACTTCTGCTTGAGAATCATTCTCAAATGTAAGTGCATTGTAACCGTTGTGCTGGAGTAAATTCTGTACTATTACCCTAAAGTTAGGAGTATTTGACACAACATTAAAGAAGATATGCTTGAACTTCCCTGCCAAAGGAAACTACATGAGAAACCAGCTCAACTATTCACGAGTAAAAATTGAAACTTTAAGACTTAATGTGGATCAACAATACATACCTTTGATATCTGGATCGTCACAAAGCCGACTAACCAGCGTGGTTTTCCCGCAACCAGGAGGAGCAGAAACCACAAGAGTAACCACAGAATCGTCAAGGAGTCTCTTCTTTAACTCCCCCAATGGCCAATCCAATCCAACAATAACCTTATCAAGCTTGGGAACCGAACAAAGATCCCTAAAAACAGGCGCAGGAACACTCAAAAGGTCCATTCTTTTACTTAAACCATCAACCGAATTCACAAGGTTTCCCGTCAAACCCAACAACGTCAACTGATTCCTATGCTGAAGAAGCTGAAGATCAATCTGACAGAACTTAAGCATATCCTTATTGATTCTCTCAATTTTTCTAGTATATTTAGATTTCTCGTACCACTTGACTCTTGGAAACTTCCGAACAGCTACATCAGCTCTTTCGATCGTATCCCTAAGTTCCTTTAGTTCCTTTACACCAAAGTCAAGCTCTTTTTGCATCGAATCAATCTTTTGAGTTAACGGAAACAATATCTCCATTGTTGATACGAGATCCTTGGACAAGGGTTTGAAAGCTTTGAACTTTTTTGCTTCATCAATCACAACTTTCAGGAGCTTGGAAAACACAGCTTCCCCAATAGAACCTATTCCCAAACTAGCCCAATCGTTCATTCTTTCACTTCTCAGACAAAACCCAGAATCCAAAAAAAAAAAAAAAACTTGTTTGTAGAATCGCTGAAAATCGAAAAAGGGGATCACTGAAATATCAATGTGTGGTTCATAAAAATGTAGATAGACGAAGGAGACGAATTGCATAGCAAAGCTGTCGCCTTTGACTTCTCAGACTCGGTCCCTTGCCGCGCAATGACCAAGGAAAACGACTGCGTTTGCGTTTGGTCTTTTACGTTAACCACACGTTGTTCGATAGACGGAACGTGCTCTCCTCGTACGTGCGAGAGTATGCCTTTCTTAGATTGGGCCTTTTTCAAAGCGGCTTATTCAAATTAAGCCTTTATGTTTCTACGGCCCAATATAACATGCGTATTTGAAAAGCTCATAATTTAAAATCACTAGTACATACAATGATACAGCGTGGTTAGTAATTTCATTACAGAGCAATAAACTAGTATCAAACCCGAGACATAGCATGTTGACTCTTGTAATATTATTACTCGTTTAGTCTAGATTGTGATCATTAAAGAGTCAATAAGAATACACAAGCTACGAAAATGTTTTTTTTTTCACTCAAAACTTAAAACGTTAGAAGCAACTTCAGGTTATGCTCTGTTTCCTCCGTGTGAACTCTCAAATTTCTCATTTCTGGCATCAACCTTTCCCACAACAATCCAGTTACTTCATCGCATTTGACCTCCAGATTCTCTAGATACCTCACTGAATCCGGCAACTCGCATCCCGAACACTTCCTCATCGAGATATTCTCCAGTTTCTGTAGTTTGCCAATCTCTTGAGGCAACTTTCTCAATCCTAAGCAATGAGAAATATCCAGAGACCGCAAGTTGCTGAGTCTCTCAGTTGCTTCAGGCAGCTCAGAGAGATTCATACAAGAACACATCCTCAACACTTCTAGTCTACTCAAGTTCCCTATAGCTTCTGGAAGTTGAGAGAGCTTGTTACAGTTTGTGATGCTAAGTGTCTTCAATGAAACAACTTCGGGGATCCAATATGGTAACTCATCAAGATCATAGCAGTAGTCTATGTCAATCTCTTGTAAATTCGATAGAGCTTTAGAGACATCTATATCTTCTGTGTCGTAGAAAACCTCACCGAAACTACACATGAAAAATGATAGCTTCTTGAGACTGCCGAGTTGCAATTGAGGAATGTCCAGCAAAGTGACTGAAACCTTTTCAAATCTAATCCGTTTCAGGTTTGGTAATGAGCTGAGACACGAGAAATTACTCAATCTTGCTGGATAAAAACCGTGATTTGCGATTGTCAGAACCTTTAGCTTCTTCATTTCAGCAATGAAGCTTGGCAATGCATAGTCTAATGAGGAGATATTAAGAACTAAAGCCTCAACATTGGGGCAATCCATTTCCAACCATTTCGATGAGAACAAATCAT