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BaseInfo

ncRNA ID	ath-miRf11022-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AUUGUUGUCUUCACUACCGA - NA
Stem-loop(if miRNA)	C        ------------CACAAUC   GAAAUUGC UAUCUUAUUGUUGUCUUCACUACCGAACGAUUCU CACCAAUU                   UAA        A |||||||||||||||||||||||||||||||||| ||||||||                   ||| AUAGAAUAACAACGGAAGUGAUGGCUUGCUAAGA GUGGUUAA                   GUA        C                                   A        AAAAAAAAAGGGUAGAAAA   GUAAAUUA
Stem-loop sequence	UAUCUUAUUGUUGUCUUCACUACCGAACGAUUCUCCACCAAUUCACAAUCUAAGAAAUUGCACAUUAAAUGAUGAAAAGAUGGGAAAAAAAAAAAUUGGUGAAGAAUCGUUCGGUAGUGAAGGCAACAAUAAGAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY060547.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:397   UCGGUGGUGAAGACAACAAU   416 Target Full Sequence	1.0	Arabidopsis thaliana AT3g20390/MQC12_15 mRNA, complete cds	NA	coding protein	psRNATarget
BX825637.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:455   UCGGUGGUGAAGACAACAAU   474 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL51ZF06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AF375446.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:469   UCGGUGGUGAAGACAACAAU   488 Target Full Sequence	1.0	Arabidopsis thaliana AT3g20390/MQC12_15 mRNA, complete cds	NA	coding protein	psRNATarget
AK227774.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:502   UCGGUGGUGAAGACAACAAU   521 Target Full Sequence	1.0	Arabidopsis thaliana mRNA for translational inhibitor protein like, complete cds, clone: RAFL14-34-N03	NA	coding protein	psRNATarget
AY086036.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:526   UCGGUGGUGAAGACAACAAU   545 Target Full Sequence	1.0	Arabidopsis thaliana clone 20767 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_112930.3	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:534   UCGGUGGUGAAGACAACAAU   553 Target Full Sequence	1.0	Arabidopsis thaliana endoribonuclease L-PSP family protein mRNA	endoribonuclease L-PSP family protein(AT3G20390)	coding protein	psRNATarget
NM_001338478.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:631   UCGGUGGUGAAGACAACAAU   650 Target Full Sequence	1.0	Arabidopsis thaliana endoribonuclease L-PSP family protein mRNA	endoribonuclease L-PSP family protein(AT3G20390)	coding protein	psRNATarget
BX824388.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:1102   UCGGUGGUGAAGACAACAAU   1121 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK229768.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:1489   UCGGUGGUGAAGACAACAAU   1508 Target Full Sequence	1.0	Arabidopsis thaliana mRNA for translational inhibitor protein like, complete cds, clone: RAFL21-64-P16	NA	coding protein	psRNATarget
BX824498.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=|||||||||||||| targets:1470   UCGGUGGUGAAGACAACAAU   1489 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH52ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX822378.1	ncRNA:20   AGCCAUCACUUCUGUUGUUA   1   |||||=||||||||||*||| targets:451   UCGGUGGUGAAGACAAAAAU   470 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget