ncRNA ID | novel_gar_miR809 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:85884774-85884831 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR3180721;SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUGGAGUGUGGAAAAAAAUGGCC - 24 |
Stem-loop(if miRNA) |
--     C   G         --   A  G   CCAUU UUU UUACGCUCU  GUG UU A   ||||| ||| |||||||||  ||| ||   GGUAA AAA GGUGUGAGG  UAC AG A CC     A   A         UU   A  C |
Stem-loop sequence | CCAUUCUUUGUUACGCUCUGUGAUUGAACGAACAUUUGGAGUGUGGAAAAAAAUGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017756106.1 |
|
3.0 | PREDICTED: Gossypium arboreum protein IQ-DOMAIN 14-like (LOC108457194), mRNA | protein IQ-DOMAIN 14-like(LOC108457194) | coding protein | psRNATarget |