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BaseInfo

ncRNA ID novel_gar_miR800
Species Gossypium arboreum
Class miRNA
Genome position Chr4:1632288-1632382 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029586;SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AGAAAGCUCUUGAGUAUUCGGUCU - 24
Stem-loop(if miRNA) --    -     U   GUA     UCUU      -    AAAAU G    U
  AGAA AGCUC UGA   UUCGG    UAGGAG GAGG     U AAGG A
  |||| ||||| |||   |||||    |||||| ||||     | |||| A
  UCUU UUGAG ACU   GAGUU    AUCUUC UUCC     G UUCU G
GU    C     U   -UG     --UU      G    ---AU G    U
Stem-loop sequence AGAAAGCUCUUGAGUAUUCGGUCUUUAGGAGGAGGAAAAUUGAAGGUAAGUUCUUGGUACCUUGCUUCUAUUUUGAGGUUCAUGAGUUCUUCUUG