ncRNA ID | novel_gar_miR794 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:119839549-119839645 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 74 - GAGAAAGCUCUUGAAUAUUCGGUC - 97 |
Stem-loop(if miRNA) |
--     -     U     A     UCAC      -    AAAAU G    U   GAGAA AGCUC UGAAU UUCGG    UAGGAG GAGG     U AAGG A   ||||| ||||| ||||| |||||    |||||| ||||     | |||| A   UUCUU UUGAG ACUUG GAGUU    AUCUUC UUCC     G UUCU G AG     C     U     -     --UU      G    ---AU G    U |
Stem-loop sequence | GAGAAAGCUCUUGAAUAUUCGGUCACUAGGAGGAGGAAAAUUGAAGGUAAGUUCUUGGUACCUUGCUUCUAUUUUGAGGUUCAUGAGUUCUUCUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017788392.1 |
|
3.0 | PREDICTED: Gossypium arboreum dolichol kinase EVAN-like (LOC108484565), mRNA | dolichol kinase EVAN-like(LOC108484565) | coding protein | psRNATarget |