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BaseInfo

ncRNA ID novel_gar_miR794
Species Gossypium arboreum
Class miRNA
Genome position Chr4:119839549-119839645 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029587
Length 24
Mature sequence(if miRNA) 74 - GAGAAAGCUCUUGAAUAUUCGGUC - 97
Stem-loop(if miRNA) --     -     U     A     UCAC      -    AAAAU G    U
  GAGAA AGCUC UGAAU UUCGG    UAGGAG GAGG     U AAGG A
  ||||| ||||| ||||| |||||    |||||| ||||     | |||| A
  UUCUU UUGAG ACUUG GAGUU    AUCUUC UUCC     G UUCU G
AG     C     U     -     --UU      G    ---AU G    U
Stem-loop sequence GAGAAAGCUCUUGAAUAUUCGGUCACUAGGAGGAGGAAAAUUGAAGGUAAGUUCUUGGUACCUUGCUUCUAUUUUGAGGUUCAUGAGUUCUUCUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017788392.1
ncRNA:24   CUGGCUUAUAAGUUCUCGAAAGAG   1
  ||==*|=**|||||||||||||||
targets:322   GAUUCAGCUUUCAAGAGCUUUCUC   345

3.0 PREDICTED: Gossypium arboreum dolichol kinase EVAN-like (LOC108484565), mRNA dolichol kinase EVAN-like(LOC108484565) coding protein psRNATarget