ncRNA ID | novel_gar_miR786 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:131388046-131388176 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR3180721;SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGUGGAUGAUGGACUAUGUAUGC - 24 |
Stem-loop(if miRNA) |
--AA          GA        -   ---C          U      AGUAAA      -A     AAU     GUGGAUGAUG  CUAUGUAU GCA    UUGUAUACUU GAUGUA      AGCUUU  GUUCA   A     ||||||||||  |||||||| |||    |||||||||| ||||||      ||||||  |||||   G     CACUUACUAC  GAUGUAUA CGU    GGCAUAUGGA UUGCGU      UUGAAA  CAAGU   A AUAA          --        A   CUUC          -      ----GG      GC     AAU |
Stem-loop sequence | AAGUGGAUGAUGGACUAUGUAUGCACUUGUAUACUUUGAUGUAAGUAAAAGCUUUAGUUCAAAUAGAUAAUGAACCGAAAGUUGGUGCGUUAGGUAUACGGCUUCUGCAAUAUGUAGCAUCAUUCACAAUA |