Search result

BaseInfo

ncRNA ID novel_gar_miR780
Species Gossypium arboreum
Class miRNA
Genome position Chr4:119021353-119021527 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029586;SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AGAGGACUCUUAGACAGAGAGCGG - 24
Stem-loop(if miRNA) --               A AG    GA   UU   CUAAAUA   GUCAAACUCGAGUCAGUGUGGUAAUGGUUGUAGUUAUUAAUGAGU
  AGAGGACUCUUAGAC G  AGCG  UGU  UGG       GAG                                             U
  ||||||||||||||| |  ||||  |||  |||       |||
  UCUCCUGAGAGUUUG U  UUGC  ACA  GCC       CUC                                             G
GU               A GA    UG   CU   -----AC   AUUUUCACUACGAAGAAAAUCCCGUUGUUACCAACAACAAUAAUU
Stem-loop sequence AGAGGACUCUUAGACAGAGAGCGGAUGUUUUGGCUAAAUAGAGGUCAAACUCGAGUCAGUGUGGUAAUGGUUGUAGUUAUUAAUGAGUUGUUAAUAACAACAACCAUUGUUGCCCUAAAAGAAGCAUCACUUUUACUCCACCGUCACAGUCGUUAGUAGUUUGAGAGUCCUCUUG