ncRNA ID | novel_gar_miR779 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:117142646-117142721 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUGUUCGAGUCUGUACUUGGGCA - 24 |
Stem-loop(if miRNA) |
--U      G     G A  UG      AUUUU      U    GUGUUC AGUCU U CU  GGCAUU     UGCUGC A    |||||| ||||| | ||  ||||||     ||||||    CAUAAG UCAGG A GA  UUGUAG     GUGAUG A AGU      G     G -  GU      ---GU      U |
Stem-loop sequence | UGUGUUCGAGUCUGUACUUGGGCAUUAUUUUUGCUGCUAAUGUAGUGUGGAUGUUUGAGAGGGACUGGAAUACUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017785742.1 |
|
2.5 | PREDICTED: Gossypium arboreum 3-ketoacyl-CoA synthase 10-like (LOC108482616), mRNA | 3-ketoacyl-CoA synthase 10-like(LOC108482616) | coding protein | psRNATarget |