Search result

BaseInfo

ncRNA ID	ath_circ_029842
Species	Arabidopsis thaliana
Class	circRNA
Genome position	5:25508868-25516918[-/-]
Reference genome	TAIR10
Source	PlantcircBase
Method	NA
Type	exonic
Splice junction sequence	CTGCAGACACAAGTCAAGAACTGGGGCATTTTTGTATCAGACTCCAGAGAACAGAGGCAATGAGGGCAAGTCACTGTCTTGGTTTTGGTCGGATAAAGGCATGATTGAAACCAACATTGCTCGAACGCGCCGGTGCCAAACAGGATCCTGAGGTTCCGTGAGTTTCCGGTGACCGAAAACACTTCCAACAGAAACGACCG
Tissues	root
Exon boundary	Yes-Yes
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CTGCAGACACAAGTCAAGAACTGGGGCATTTTTGTATCAGACTCCAGAGAACAGAGGCAATGAGGGCAAGTCACTGTCTTGGTTTTGGTCGGATAAAGGCTAAATGATTCATCTGATATTTTCATTGTGGCACTACACAACCAATCAGAGGCCTTGTTACAACTCACTGGTCTGTGTGACTCAAGTCTGCATCTCCAACAGAAGATATGACCACAGATACACACCACGTTTAAACTATACTCATCATCATCATCATTCTCTTGATGAAACTCAATAACATAATCGCAATTCCGTGCAGGACACTGTTTGATCATCAATACCTTGTTTCCTTCAATGTAAGATCTCCAAATGTACCTCTCGTACATCTCTTGATCACGTACTGTTAGTTTCTCAATCGTGTCTGGTCCAACCGCAGATCGACAATCTTGATCAGGACAAGAGATTGTGGTTTGGATTTTCTCCACATAGTAGAAATTCTTCTCAAGATACTCTCTCCAATATTTTGAGTCGAACTTGTGAGAACAAAAGGGCATGGAGATTAAATCATTATCACCATCAAACTCATAAACATCAGTCTCCAAGCTAATCTCGCTAGATGAATCTGGACTGGGATCGATCATGACTGATTTCAAACCTGAATCCATCAATAATTTCTCCTTGTTTTCACCTAAACGCTCTGAAACACGAAGCGAGTCCCATCGGAGATACATAAGAAGTACGGTCGCATCGGAGTTTGATATGAAGAAGATGTCAGAGATTTCATTGATCTGTTTCTTCATCTTTACGGTAATTTCATTTCTCGTTAGAACAGAGTAGGGTCTCCGTCCATCGTACTCCATTGTTTTCTTGAAAATGACAAAACAAAAATCAGAAAGACAAATCGATAAATTAGTAAAGAGCTAGAGAAGATAAACTTGTAAAGAAATAGGGTTAAGGCTTACTAGTAGCTTGCGCCAGAAACAACAAGATTGAATCGAAGGTGGAGATAGCTAATTATCGTCTAGGGTTTGCCATTTTTCACTCTCCAACGGGGGAATTGGGGATATCGTCAAGCTACAAAATTATTATGTTTTCGCTATTACATAATGTTTGATAAAAAAGATTTTTGACAGCATAAAGTTTGATAATGATATCTTTTTAATTAAGAAATTTTACGTTGTTACATAATTAAATAAAATATGACCAAAATCATTTATTATATTGTTATTCATCACTAAATATATATTGGAGCAAAATTTAAATTTTTATATACTTAATTATTTACTATTTAGTAATATTAATTAAATTTATACGATATGTCAATAATCAATTATGGTACTTAAGTGGTTGAAAACTTATCATAGTTTTAGAAGACCATATCTAGAGACTAGAGTCTTCCTTCTACTATTTGGACTAAATTCAATAATTGGCATAAATATAAATGGCGCAAAATAGGTATAGTCACAAAATGTGAAATTTTTATATATATTTAAAAATTATTTAGTAACATTAAATTTATACAAAGTAGAAAAGAATCACAATTTTTATTTGAAATTTTTTGGCACGAAATAGATATATGGGACGAAATAGATTTGTGGCGCGAATTTTGTTTTTGTTATATATAGAATTTAAATCTATGACAAAGTAAAAACAAAACTATAATGTATGGTTAAAAACTTATCATGGTAATAAGAGAAAAGATTTTCGAGTCTTAATCATAAAAAGATTCAATCATTTGACTGTAAATAATGTTTTTAATGGCAAGAACATGATGTTTCATATATATAAGTTTTGAAAGACTATTACACTGATCAGCTCGACATCCTCGATAATTTAAAAATAAAATAAAAAAATGGAATAAATGCATTTCATAAAAGAAGAACCAAATTTTCCTTTTGAGTAAATTCAAATTTGGTCAAATATAATGGCCTAGTTGTCATCCGGTGCAGGGAGCTGTTTGCTCTCATTCTCAATGTAAACTCTCATAACATAACTCAAGTACATGTCTTGATCATGTACTCCTAGTTTCTCAATCGTTTTTAGTCTAACCGAAGCTCCACAATCTTGATCAGGACATGAGATTACGGTTAAGTTTTCCTCCAGAGAGTAGAAATTTGTCTCTAGGTACTCCCTCCAACAAGTTTTGCAGAACTTGTGAGTACAATAGGGTGTGGAGATTAAACGATGACTATCATATTCATCATCGCACTCTTCATCATTTTCATCATCATCATCATCATCATCATCCTCATCTTCATCGTCATCCTCGTCATCATCATCTTCATCATCATCAGCATCATCAGCATCATCATCATCATCATCATCATCATCATCATCATCATCCTCGTCCTCGTCCTCGTCCTCGTCCTCATCCGCATCCGCATCCTCATCCTCATCCTCATCACCATCACCATCACCATCACCATCACCCTCACCATCATTGTTATGATCATCATAAACCTTAATATATTCATCTTCAGCCGTACGGCAAATACCACAAGTTGAATTAGATAAAACTAGATTCGAATCAATGACAACGGTTCTGATCCTTTTCTCCATCTCTTCCTTATCCTCATCTCTCAAGTACGATCCTTGTTGATCGTTCTCCATTGTTTTCTTCAAATTAACAAAATATCAGATTGATTAATCGATAAACTACCAAAAGAGAGAAATATAAACTTGTAAAGAATAGAGTTAAGGCTTTTACTAGTAGCTTACGCCTCAAACAACAAAATTGAGTCGAAGGTGAAGGGAGATTTTCCCTTCTCTATTGGGATATATCGAGATACAAACTTGTTCTGTTTGTGCTATATTTATAGTTTGATAATCCAGTTTTCTAATTAATAAAATTGTCCCATTTGATCTTAATCTTGCTACAAAATGGTGATTTGTATTAACTATACAATATCCAATCTAGGTTGATTTTTCTTTTCTTTTGGGGGACAACCTATATAGAAGTTTATTTAATTCACCATTATGTTTCCCAACAGATGGCACAAATTAAGTTAGGTAAAAGACAATATTTGTCCAAAACAAATTCAAGAACATGAAGAAAACTAATCTTAAAAGAGTGTAAAGAAAATAAGAGGACAAAAGAATTGTAATCAAAGCCTAAAAGGCTAAAACCTTTAATGTTTCCTAAATCTTTTGTTTATCTTCAAGAAAACATAGAGGACATATTTCACTAAGATTTCAAAAAGAGTTTTTTTTTTTAATGTCAAATCCCTTATTATGGAACTTATGATTTAATAATCTTCTCAAATCTAGTCTTACTGAATTTTATACTAAAATCATTCAAAATATGATGGTATTGGATCAATAACTTATAAAAGTAATTAAATGATAACCCGAGATGTGTGCGCGCGAAATAGAGAGATTAGTAGATTAATTCAAAATAGCATTAGTTAAAGAGTAGAATAATGTTTTTTAAAAACTTTCAATTTGATGTAAGGAGATTATATCAATATATATGTAACATTTACATGTACTCCCTCTTCGAGATCTCATATAAAAATGTAACATTTACATGTAATGACTTTTTGTTGGTTTAACTTGAAATATGATCGTCTTTTGATTTCTTAAAGATAAATTAGTTGATGTTCTGAGCTATGCACGGGAGAAACTAGTTCTTAAGATTTGTCTTTGCGAAACTAAAAGTGTATGTTAGTGTATGATAAAACAAAAATATGAAAATTTAAAATACTCATTTTAGTGCTTTATAATTTTGCCAAGGTTCATCTAAATAACTAAATGTCGCTGAGTTAACTGAAATCATGCAACTAGCCAAACATATTTAGTAAAATATTTTTTTTGTAATCTACGCTGGTTTTGACATATCTTACGTAGAAGCGAAATAAGAGAACTTGTTAACTCATCTTTTTCCATTTAGCCAATGTTAGAAAAAGAAATACAAAAAATATCCATTTATGTACATATATATATATATATAGGTGCTATGTCTCATCTCTTCATGATATATGATTTTCTAAGTGCAAAGATTGTCTATATTCTATGAGAAAGTTTCAACGAGTTATGTATGCAAGGGATAATGCCAAACTAGATGAAGTAAAAAAGATATTATTTGAGACGAATTCCAAATCGCAGTACCTTTGAATTATTAGAATATCTCTGAATTTATTTAAAAACCCCACCAAAACAATTAAAATTCTTAATCCATTAGAGCTCCCTTAGTTAATTAAGAGACATATCACTTAGATCCACACGAGCTGCAATATCATCACTGCACATCAAACACTCTTTATGGAACCAAGTGTTTCCATATGTGCAGCGATCACAGAGCCAAAAAAGACCACCATAGTCGTCGTAGGACTTCACCTTCACGTCATCCAAACCTTCTTGTAAAGTCTTGATGAAATGATAAAAGTAGTTCCCAATGTTGCTTGTCTCAATGGTTACCTTATGCTTGACGCAACAAAAATTTTCATAAGTAGCTGACGAGGCTCTTCCTATCTCCTCATTTAGCGTCTTTGAGAAACTCTCCACCAGTGAGGTCGCGTCTGCTTGCAGGAATCGCAGGTACTCCCTCTTCGACATCTCATACTCTGCATGTAAGTAATCATATACACAGCTCCATTTAAGGACTTGCCTGCATTGGACAATCAGCATCAATCCTTTTCTTATAATGGTAAAGTCTTTCTCGGTCAAGTCACTTGGATTCTTGATGTTGGACTCCTCAAAAGCTTGTAGATCAGATTTAGCTTGCTTCAGTGAAACCTCACTCGCCTTCCAGAGTCCCACGCACGAATTCTCCGGTTCTGCTCTTCCCTCGAGTGTCTTGGGTGCTCTTCCCTCGAATGTCATCGATACATTACAGAATTTATAGAATCCTGATTCCGTTTTGTGGGCTTCCTCTGGCTGCATACACTTCCAGCAGAAACGACCGCTAGATCAAGAAACACACAAATTAGTATGATCAATAATGCTTCAAATAGAGAAATCTAATTTGCAAAATAGGGTTTCTTACTTGCAGGCACAAGTCAAGAACCGGAGGTATTGTTTAGTACCAAGATCCGCAGGACGAAGACAATGAGGGCAAACTTTCTTGGTGGCTTTGATCGAGGAGAGAGGGTAAGTCTTTTCTCTGGTTTCGAACGAGGAGAGGCTCAATGGCTTTTCACCTGATTCCTTCGATAAGCTATTTAGGTCTCGAAACAACCAATCAGACGCGTTGTTGCAGGTCACTGGTTTGTGTGACTCAAGCATGCATCTCCAGCAGAAGATATGACCACAGAGACACACCACGTTGAAGCCATAGTCTTCCTGATCAGCACCATCATGATTCTTCTGATGAAACTCAATGACGTAATTGCAATCCTGTGCAGGACAGTATTTGATCTCCAATACCTTGTTTCCCTCAATGTAAGATCTCAGAATATACTCCACGTACATCTCTTGATCACATACGGTTAGCTTCTGAATCGTGTCCGGTCCAACCGCGGCTTGACAAGCTCCATGAGGACAAGAGATTCGAGTTTGGGTTTTCTCCACCAAGTAGAAATTCTTTTCAAGATACTTTCTCCAACAAGATTTGCAGAACATGTGAGAGCAAAAGGGCGTGGAGATTAAGTAATCACCATCATCACAAGTCTTAAAGCAAATCCCACAAGAAGAAATCTTATATAAGTCTTGATTCGGATCAACTACCACTGGTTTCAAACCTGATTCCGACAAGACTTTTTCGTTGTTTTCAACCAAAAACTCAGAAACTTCATGAGAGTCCCATCGGAGAAACATGAGGAGTACGGTCGCATCGGGTTTTGATAACGAGAAGATCTCAGAGATTTCGGCGATCTGCTTCTTCATATTTCCTTTAAGTTGATCTCTCGTTAGAACAGAGTATGGTCCCTCTCGATTGTTCTCCATTGTGTGCCTAAGATTGACAAAAATCAGAAAAACAAATCAATGAATCATAACAAAGAGATCGATCGATGGATACACTTATAAGGAATAGGGTTAAGGCTTACAGGTAGCTTGCGCCTCAATCAACAAAAAGAATCGAAGGCGAGAGTTATCGTTCTTAGTTTTCTCTTAATCGTCTCTAGATGATTTCTGTTTCAACTTTTTAGGGTTTTACCTTTTCTCACTCGCTTATGGGAAATATCGAGTTTTATAAGTAAACAAAACTATTGACCAACAAAAAAAAAACAAGTAAAAAACTATCTGTTTTTGCTAAATTGCCTGATAAGTTTTTAATTGGACCATTGGACCTTCATCTAAGCTAAACAATCGTCTAATCAATAAATATGGCCCATTAGCACTTCTTGTTTTGTCTTTTTGGGCCCAATTCGGTTTATATAGTAATCTTCTGAGGTTTCAGTTTTTGAGAACAAAACTAGTCGAGTGAGAGATGGAAAAAGGGACGACAACAGAACCACATATTTTCTTGTGGAGTCAGAGGACTGAGAACATAAGAATCATAAACTTATGCTTAATGCATAACACTTACACTTTCTTGAAGTATATGAACTTAAGACATCCCCTACAATTTCCTACATATGTCTCCTTCAGTTTCTCTTCAGAGAATCCACTGATTATTTCAATAAACTCTTCATCTCTGTGTTCTTTCTGAACTATCAGAACAACTTGATCTTTTGGTGGAATTTTTCATCAACAACTTGATCTGTCTCAGCATCACTTTCTGTCTCAGTTTTACACTCCTCGAATCAGTTACTAATTTTGTTGTGTGTTTGAGGTTTTAGAAAGCTAAGTCTTGAGCCTTAAATAAACAATTGATTTTTGTTGTGGGCTGAGTCTGTGGAATTGATTGAGGAACCTAATCCATGATATGAAGAGGTAAATGAAATCCCTGTTAAACCAGACGTTTTCTACTAACTACATGGTTTTGATTGATCAAGAGTGTATTAAAAAAGGCCAAGGGGCTCTAATTTCGACTATGATAATTTATTTTACCAAGAGCAAGTAAATAAAAAGATAGAAATTATTCTGATGACTAATGAACATTTGAAAACACAATTTATAAGTCTAAAGAACAAAGTTCTTTATCAGTTGACAAGAAATTTGGGATCTTCAGATGTAAAAGCAGTGCTCTTCATCTTCTGTTTTAGTCCATCTTCAGGGCTTTTAGTTCCTGAGAGCAAAACTACAGTAGTAGAGCGAGGGATGAAAAAAGACAACAACAGGACCACATATTTTCTTATGGAGTCTGAGAACATCAGAGCCAAACGTTGCTTGTCACAAAGCATTGTAACTGTGAACTATCAGGAAAGAAAGAAAAAGTCAATTCGACATTGAAAGTTGGTAGTCCAATATAAAACTGCAGAAAGAAAGAAAGAAAGAAAGCAAAAAAAAAAACAGAACTTAAAGAGTTGCAAGGTTACTCTGTCTCCTAGAACCTTTTGTTTTATCTTTAAGAAACCTAGTTAAGCGATCAATCACTTAGCTCGTCCATCTTAGACGCAGTAGGATCACAGCACATCTTACAGGCCCTCTGGAACCAAGAGTTTCCATATGTGCAGCGATCGCACAACCAGTAAGGACCACCATAGTTGTCGTACGACTCCGCCTGTACCTCGGGCAAACCTTCTCGTAAAGTCTTGATGAAATGATAAAAGAAGTTCCCAATGTTGGTTGTCTCGCTCAATAGCTTACCGCAAGTAAGCTCTTTGGCTTCTGTTTCCTCCTTTATACTCTGTGAGAAACTATGGACAATGCCAGACGCGTTTTGTTGGAGGAATCGCAGGTACTCTCTCTTCGCCATATCATACTCTGTGTGGATATAGTCGTACGCACAGCTCCATTTGAGGAACTGTCTGCACTGAACAATGAGCATCAGTCCTTCCCTTAGTACCTTAACGTCTTGCTCCTTCAAGTCACTAGGTTTCTTGATTATGGATTCCTCGAAAGCTTCTAGCTCGTATTTAGCGTTCACCAGATTCACTTGACTCGCATTCCAGAGATCCAAACACGAAATCCCCGGTTTTGCTCTGTTCCAATGATTGAAACCAACATTGCTCGAACGCGCCGGTGCCAAACAGGATCCTGAGGTTCCGTGAGTTTCCGGTGACCGAAAACACTTCCAACAGAAACGACCG