Search result

BaseInfo

ncRNA ID	ath_circ_029825
Species	Arabidopsis thaliana
Class	circRNA
Genome position	5:25433387-25435473[+]
Reference genome	TAIR10
Source	PlantcircBase
Method	SMALT and Segemehl
Type	exonic
Splice junction sequence	GAAGAGAAGAAACCAGAAGCAGCAGAGGAAAAGAAAATGGAAGAGAAGAAACCAGAAGAGAAAAAAGAAGGAGAAGACAAGAAAGTGGATGCTGAGAAAAGGCGAAGACGGACGAAGAAAAGAAAGAAGGGGATGGTGGTAAAGGGGAAGGCGAAGCAGCGGATAATGGCGGTGGGGAGGAAGAAGGCAAAGTTGTGGAG
Tissues	siliques and seeds
Exon boundary	Yes-No
Splicing signals	AG-GT
circRNA sequence	NA
Genomic sequence	GAAGAGAAGAAACCAGAAGCAGCAGAGGAAAAGAAAATGGAAGAGAAGAAACCAGAAGAGAAAAAAGAAGGAGAAGACAAGAAAGTGGATGCTGAGAAAAAAGGAGAAGATTCTGACAAGAAGCCTCAAGAAGGAGAATCTAACAAAGATTCCAAAGAAGATTCTGCTCCGGCGGCGCCTGAGGCTCCAGCACCGCCTCCTCCGCCGCAAGAGGTTGTTCTTAAGGTTTACATGCACTGTGAAGGATGTGCTAGAAAAGTCCGCCGTTGTCTCAAAGGCTTCGAAGGTATGTATTAAAAACAGATATGTGTAGAGAAAAAAAAAAGAATTAATTGATTTATATAATTTTGCAATTCCACACAAATCTTTTGGTTTACATTTTTAAAAATATAAAAAATTCAGTTTTCCATAGAATAGTTTCGGAAACAATTTTTTAAAGATGATTAATTATATTGTGGCTTTATTTTAAAAATATACAATAAACACAATTATCTTGTATTCTTTCCAGCATCCTATGTCAATTGCTGTAACTGGATATATCTTGTTTCTGTCAACTATAGTTTTTTTGGTTAATCTCGTATCTAAGTATAGTTAATATTCGTCATATAATTTGTGTGTAGGGCCACATAAAGTTTTGGTTATGCTTTAGTATTATAGCTTTTGTTTTTTAAAAACACTCAAACTAGAAATTCTGTTTTTGGGTAAAAATGGTAAAGCTAATGGTTTATAAAAAAAATATATAACTTTGGAATTTTGGTTGAATTAATCAATTAGGAGTGGAAGATGTGATGACTGATTGTAAAACGGGGAAAGTGGTGGTGAAAGGTGAGAAAGCTGATCCATTGAAAGTATTAGCTAGAGTTCAGAGGAAGACCCACCGTCAAGTTCAGCTTCTGTCTCCGATTCCTCCTCCGCCTCCGCCGCCGGAGAAGAAAGCAGAGGAGGATAAACCCATTGTGGAAGAGAAGAAAGTGGAGGTAACTTTGTTTTTAGTGGTCTAAAAGCTTTCACCTTCTTTATTGGTAAAAAATAAAATCATATTTTTAATTTGTTGTGTTTACTGAATTTGACATTACAACCAAAAAAGAAAAGAAAAAGGAGTTTTTTTTCGTTGCTTTTTAGGATATTGGTATGAATATTCATTTTATTCTCTATTATTCTATTTAGGGTACGAGTCATTAATTAAATTACTTATTATTTAATTAAAAAGAGAATATTCTCTTTGCAGTGATTTCACATGGGGTGTATTGGTAGGATTTGGTTATATCTTATTTGATGGTTTTATGAACGTAGAACTTCTTATATTTGTGTATGTGGAAATTTGTGTTAAAGTTATGATTTTATTAATTTTGCGGCGAAAATTTTGGAACAGCCTCCGGTGGTTGTGACGGTGGTTCTTAAGGTTCACATGCACTGTGAAGCTTGTGCGACAGAGATCAAGAAACGGATCATGAGAATGAAAGGTTAGTTTTCACCAAACTTTAGATTATCTTTCGTTAGTAGTTGCATCAAATTTGGTCCATACAATTTCAAATCAGGATCATATTGCTTCGACTTTAAAATACACGCACACGTGTTATTTATTTATTTTATACACAAATTACATTATTTATTGACAGCATATGTAATGTTTATATGATTTTGTTCCAATTATATGTAGTGGGGTCAGTGTGTATTCGGTCCTTCACTTTGATAGTATACTAACTGAAATTTTCTTACTCATTGTTGTTTGACATAAATAATTTGTAGGAGTGGAATCTGCTGAATCCGACTTAAAGAGTTCTCAAGTGACGGTGAAAGGAGTTTTTGAACCACAAAAGCTTGTAGAATACGTTTATAAGCGAACCGGAAAACATGCTGCGATCATGAAAATCGACCCACCGCCTCCACCACCACCTGAGGAGGCGGCTGCGGCAGCGGAAGGAGAGAAGAAGGAAGAAGAAAAGGGAGAAGGAGAATCCAAAGGCGAAGAAGGGAAGGATGATAAGGCGAAGACGGACGAAGAAAAGAAAGAAGGGGATGGTGGTAAAGGGGAAGGCGAAGCAGCGGATAATGGCGGTGGGGAGGAAGAAGGCAAAGTTGTGGAG