ncRNA ID |
ath_circ_029822 |
Species |
Arabidopsis thaliana |
Class |
circRNA |
Genome position |
5:25433387-25433672[+] |
Reference genome |
TAIR10 |
Source |
PlantcircBase
|
Method |
find_circ/NA |
Type |
exonic |
Splice junction sequence |
GAAGAGAAGAAACCAGAAGCAGCAGAGGAAAAGAAAATGGAAGAGAAGAAACCAGAAGAGAAAAAAGAAGGAGAAGACAAGAAAGTGGATGCTGAGAAAACCAGCACCGCCTCCTCCGCCGCAAGAGGTTGTTCTTAAGGTTTACATGCACTGTGAAGGATGTGCTAGAAAAGTCCGCCGTTGTCTCAAAGGCTTCGAAG |
Tissues |
leaf/aerial, inflorescences, seed, whole_plant |
Exon boundary |
Yes-Yes |
Splicing signals |
AG-GT |
circRNA sequence |
NA |
Genomic sequence |
GAAGAGAAGAAACCAGAAGCAGCAGAGGAAAAGAAAATGGAAGAGAAGAAACCAGAAGAGAAAAAAGAAGGAGAAGACAAGAAAGTGGATGCTGAGAAAAAAGGAGAAGATTCTGACAAGAAGCCTCAAGAAGGAGAATCTAACAAAGATTCCAAAGAAGATTCTGCTCCGGCGGCGCCTGAGGCTCCAGCACCGCCTCCTCCGCCGCAAGAGGTTGTTCTTAAGGTTTACATGCACTGTGAAGGATGTGCTAGAAAAGTCCGCCGTTGTCTCAAAGGCTTCGAAG |