ncRNA ID | novel_gar_miR770 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:93338654-93338814 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 138 - AAAGGUCGUGGCCUUUAGCGGCUU - 161 |
Stem-loop(if miRNA) |
GC G A      AU    GU       A      GUGAAAA            A GU    GU U     A      GU   G C CUAAAG  CAUG  CUUUAGC GCGUUU       AAGUGCCGCUAA G  CAUG  C UUAGC GCAUUU  G   | | ||||||  ||||  ||||||| ||||||       |||||||||||| |  ||||  | ||||| ||||||  A   C G GAUUUC  GUGC  GAAAUUG CGCGAA       UUUACGGCGAUU C  GUAC  G AAUCG CGUGAA  A UU G C      CG    UG       A      AAGGGCG            A UG    UG U     C      AA |
Stem-loop sequence | GCGGCACUAAAGAUCAUGGUCUUUAGCAGCGUUUGUGAAAAAAGUGCCGCUAAAGGUCAUGGUCUUUAGCAGCAUUUGUGAAAAAAGUGCCGCUAAUGGUCAUGGUCAUUAGCGGCAUUUGCGGGAAAAGCGCAGUUAAAGGUCGUGGCCUUUAGCGGCUU |