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BaseInfo

ncRNA ID novel_gar_miR769
Species Gossypium arboreum
Class miRNA
Genome position Chr3:81760076-81760142 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR3180715;SRR1029586;SRR3180719;SRR3180720;SRR3180721;SRR1029587
Length 22
Mature sequence(if miRNA) 1 - ACUCUCUUCCAAAGGCUUUGAG - 22
Stem-loop(if miRNA) --            A           GCUAU    A
  ACUCUCUUCCAA GGCUUUGAGCU     AUGA A
  |||||||||||| |||||||||||     |||| C
  UGAGAGAGGGUU CUGAAACUUGA     UACU A
AG            -           -----    A
Stem-loop sequence ACUCUCUUCCAAAGGCUUUGAGCUGCUAUAUGAAACAAUCAUAGUUCAAAGUCUUGGGAGAGAGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017790146.1
ncRNA:22   GAGUUUCGGAAACCUUCUCUCA   1
  *||||||=*||||||||||||*
targets:2121   AUCAAAGUAUUUGGAAGAGAGA   2142

3.0 PREDICTED: Gossypium arboreum peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like (LOC108486224), mRNA peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like(LOC108486224) coding protein psRNATarget