ncRNA ID | novel_gar_miR758 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:51409534-51409652 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CACCGGUUGUGCCUCUGGCAGAGG - 24 |
Stem-loop(if miRNA) |
--       UG        G      CG   -     UG           GAGG G     G   CACCGGU  UGCCUCUG CAGAGG  GCA CCGAU  UGCCUCUGGCA    C GCACC G   |||||||  |||||||| ||||||  ||| |||||  |||||||||||    | |||||   GUGGCCA  ACGGAGAC GUCUCC  UGU GGUUA  GCGGAGACCGU    G UGUGG G UG       CG        G      -A   U     UG           ---G G     U |
Stem-loop sequence | CACCGGUUGUGCCUCUGGCAGAGGCGGCACCGAUUGUGCCUCUGGCAGAGGCGGCACCGGGUGGUGUGGGUGCCAGAGGCGGUAUUGGUUGUACCUCUGGCAGAGGCAGCACCGGUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017792849.1 |
|
2.5 | PREDICTED: Gossypium arboreum adenine/guanine permease AZG1-like (LOC108488562), mRNA | adenine/guanine permease AZG1-like(LOC108488562) | coding protein | psRNATarget |