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BaseInfo

ncRNA ID novel_gar_miR758
Species Gossypium arboreum
Class miRNA
Genome position Chr3:51409534-51409652 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - CACCGGUUGUGCCUCUGGCAGAGG - 24
Stem-loop(if miRNA) --       UG        G      CG   -     UG           GAGG G     G
  CACCGGU  UGCCUCUG CAGAGG  GCA CCGAU  UGCCUCUGGCA    C GCACC G
  |||||||  |||||||| ||||||  ||| |||||  |||||||||||    | |||||
  GUGGCCA  ACGGAGAC GUCUCC  UGU GGUUA  GCGGAGACCGU    G UGUGG G
UG       CG        G      -A   U     UG           ---G G     U
Stem-loop sequence CACCGGUUGUGCCUCUGGCAGAGGCGGCACCGAUUGUGCCUCUGGCAGAGGCGGCACCGGGUGGUGUGGGUGCCAGAGGCGGUAUUGGUUGUACCUCUGGCAGAGGCAGCACCGGUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017792849.1
ncRNA:24   GGAGACGGUCUCCGUGUUGGCCAC   1
  |||||||||*||||||*|||||||
targets:152   CCUCUGCCAAAGGCACCACCGGUG   175

2.5 PREDICTED: Gossypium arboreum adenine/guanine permease AZG1-like (LOC108488562), mRNA adenine/guanine permease AZG1-like(LOC108488562) coding protein psRNATarget