ncRNA ID |
ath_circ_029670 |
Species |
Arabidopsis thaliana |
Class |
circRNA |
Genome position |
5:24872634-24877907[+/+] |
Reference genome |
TAIR10 |
Source |
PlantcircBase
|
Method |
NA |
Type |
exonic |
Splice junction sequence |
GATGTTGGTGACTGGAAGAATGTGGTCAGATTCTGTGGAGAGAGGAAGGTTCGGCCAGAGATTCTGCTTTACGAAGCTGCCTGATCGATGGCCTAACAAGGATGCAGGTTGGTTGTGGTGAAGGAGAAGAAGAACACGTATGCCTAGCTTATGAAAAGAATCGGTGGGTCAATCTCAGACGTGAGTGTTTTGCAGGAGAG |
Tissues |
root, aerial, inflorescences |
Exon boundary |
Yes-Yes |
Splicing signals |
AG-GT |
circRNA sequence |
NA |
Genomic sequence |
GATGTTGGTGACTGGAAGAATGTGGTCAGATTCTGTGGAGAGAGGAAGGTTCGGCCAGAGATTCTGCTTTACGAAGCTGCCTGATCGATGGCCTAACAAGTGACAATGTGGAGAAGTCTAGCATTGATGTTTCCATCTACCAGAAGACACTTTTTTATCTTTGCTTTGGTTTTTTTTTTGATGAGATCGATGTGATCCAAGTATAACTACGGTACCTCTTAATTCACTATCACTTGAGTCTTAAGAGTGTTGTTACACAAGATAGAAAACATAGAGAGCGAGAAAAAAAAGATTGAAAGAAAATGCAGAGCTTGAGCTAAACGTCTTATAGCGATTACCTCAAACGACATCGCTTAACATCATCAATAGATACAACCACTTAACCGGCTCGGTTATCTTTCTGGTTCGTTTAAATCCCCGAATACTCCGAGCGAGTTAGAGTCTTTCCTTCAACGGCAAAACCAAAACCTCTCAAGAGTTCCTTTTATTGTTTTTTCAACATCACTCTCCATTTTTTGTAAAAATAAAAATATCTAATTTTTCTTGTGTGGCTCTCCAAACATTTTCACGAATGTTGTTCATCATCAACATGAAGACCATTCCACATTCAATTCTTAACCCATATTCGAAGATTCACTCAATTTTTGGGTCTTTTTTTGATTTTTTTATTCCGAGAAAATCCCAAACGGATAATGCACACAAGGTGTTCGACAAAATTCCCCAATACTCAAAATTGTGGGTCTCTCTCTGTTTGTTTAAGGCTTGTGTCACGTGGCTCTCACGTGATATAAAAAGCCAGCCTCTTCTTCTTCAGTACCTTACGGTTATAATCGTTGATTGTTCCCGCCTCTACTCTCACAAATCTCTCTGAATCATCGTGATCCACAAAACAAAACCTTCGAGAGCAAGAATCATCGTGAAGAATCGTTACTATGGCGTCTTCTTTCAAGAAGGATGTTATGGCGGAAAGACTCTACAAAGACGCTGAAGATCTCATCGCTAAAGGAAATCACATCAAGGCCTTGGAGATACTTGAAGATTTGATTTCAATCCATTGGAATGCCAATGACGCATGGCTTCTTCATATCGAACAAGGTAATGTTTTCGTAGACCTAGCTGAAAAAGCAGAGGACCGTGACATGGAAGTCGCATACTTGTTGGGTTGTGTTGCTTGCTTTTCGCAACATGTGACGGTATTTGAACTTTGTGCACAATCACTCTTCATGTTGGGCAGAAACCTTGCGTCTGTGTCACATTACAAGAAATGCTTGAAGAAAGCAAGAGAGGCTTTATCTGATAGTAACTCTAAGAAACTGAGTTCTTCTACTCCAGTGGCTTTCCGAGCCATAGTATCCCGAAAGAAGAAAGACCTCGAGGGTTTTATCGAAGATGCAGAGTCCATGATCGCTGCTTCCAAGACTTCTCCTTTACAAAAACCTGAGCCAAAAGTTCGGGACCCAGAGAAAACTCCAGAGCCGTCTAAGGATGATTTTCAGCGGTTTAGGTCCTATTGGGTGGGATTGGATGTTAAGATCAAAAGGGACTTTCTGAAAGTAAGCATTGCAAAGCTTACAAGTTTTGTCGGGGGAATACGTAAAAGAAAGGCACAAGAAGCTTTGGAGCAAGCTCTAGCTTCCAAGAAAGACAGAAAATGGACATTCTGGATGTGTAGAACTAAATGTTCCAAGAGGTGCTCTAGTGTTGAAGAATGTAGGAAGCATTTTGAACAACAACACGATGCAGATTTCAAACCTTCTTCAGAAAAGGATATAGTCAAGCGGATAGGAAATAACTGGGCTCGTAAGATATCGCTTGGAGGTTGGGAACCTGTGGATGCGGTAGCTGCCGTTGAAATGATCAAGAATCAGCTCGCAGATGTTAAAGCGTTTGCATCTAAATCTAAGAATGGATGGTCCTACGAATGGCCTTTAGCTGTCGATGAAGAGCGCAAGCAGTTACTCCAGGAAATCAAATTGCTCCTTGTCTCTTTTTGCGAGCTGAAAATACTCTCTGGTAGCATGCGAGACTGGGTGATGCATTTTCCAGTTAAGTATCTTGCAAAACTTGAAGTTTCCAAACAAGGGCTTATCGATTCTCACCTATCAGAAACACCTCAGAGTATCTGTTTTCTGGAATGTCATGAACTCACTCGAATCCTAGACTTTCTGAAAACCATCAAGTGTAAAAGGAATGATGGTACAGATCAGGTTTGCACAGCAGTAGATAGTGTCTTAGGTCGTATTCAAGTCAAAGTAAAGATCGACTTTGACCCTCAGTTTTCATTTCTGCTTTTAGATAAAAGACTGCTGAAAATCAATGATGTTCAATTCGATGATGATGAAGGGACGATCAATGTTTTGGATCCCAGTGCTCACTACGCCAAGGCACCAGTTCATGGAGATGATATCATATCCTGGTTAACTGACTACAATTCAGTAGATAAGACCTTTCCCAGACCTATCAGGGAACACAATCTTGATATCTGGTTGGCTGTTTTGAAAGCTGTTCAGTTCACCTGTAGGACTCTGGGAAACAAATATGCAAAGAAAGTACAGGTCGTGGACTATGATGCAGCTCTTACTGATGTCGAGAACATGTGTGTGAGCGAAAATGAAAGGAGAAAGAATCTGCCGGAAGATCAATGGAGCAGATATGCATCTCTTCTATGCGATGTGTGTGAAGAGAGAGTCCCCAAAAATTCCCTTACTACAAAATTATTCGTGCGTGCAGTAAGAGATGTTTTCGAAGGAGCATTGCATCCAACACTTGATTTCCTCGATTTAGAAGATTGCTTGAATTTTATACGTGAGCACAAAAGTCTCAGTGACGATAAAGTGTTGCAGGCCATAGACCTTCTGAAATCAGTGGTCACCCAAAAGGTTCGTCCATGATTTTAATATTCATTAACAACAGAATACCATGAAATTGTCCATCTAAAAGTATCTACATGACTTGCAGGTTCTTTTAATGGATACAAAGATCTTGCTGATTGATAATTCAAGGATAAGTTTGCTAAACAACCTCACAAGGCTTTCTGCTTTTGATAACCGCACTTATATCCTTCAACTGCTTAAACCTTTCTTGCTGGTTGGTTTGAAACTGTTATATACAGAAAGATTTTATTTTCCGTCAAATTTTTCCTTTGAATTGTTTCTCATATGTTATTATGTCTCTTCTCATCCAGAACGAAATTGTGAATATGGAATCCAAAGCCAAGTCAGATGCAGCAGAAGCAGATCTTTTAAACGAGTTGGAGAAGGAGAAGCTACAACCGAAGGAGAAGCCACAATCAAAGGAGAAGCCACAATCAAAGAAGAGGAGAGATAGAACCAAAAAGGTCTTTGAAGTTCTAAATTCTCTATTCGCTTCTCTGAAAAATACTTTTGAAGATATATCGGTTAAACTATAAGTAATATGTCAATAACATCTTCCTATCTTATAGGGATATCATATCTTCTTTGTAGATATCGTTTCCTTACTTGTAGGATTCCATGGTTTGTGTATATAATACTTATATGGTTGATTTATCTTCTTGACGCAACAGAAACCTTCAACGAGCATATCTAGTCTCCTTGATAAGACTGTTGAACAGTAAGTACCTCAATGGTCAGTTCGCATGTTATAAATTGTTTTCGGGTTTTCTCTGACAAAACGTTTTGTTTCATGTACAGTAAACCTGAGAGTACATCTCCATCACTAAGAACGGTTGAAGAAGATTCTATGGAACCAGAAGATGCTCTTGCAAGTGAGACGGGTAGATTGGAAATTTCATCCAAAACAGAAATTCAAGAGGAAGCTACTAAAGATGACCCTGGTTGTTAAAAGCTTCACAATTGACCAATAGTTTGAACCATTTTGTTTTTAAGATGCATAATTCTTATTTCTTTCATTCGCCATTTTCAAGATATGCATAGCAGACATGGAGAAGATCCTCTGTCGGACCATTTGGAGTCAGCAGCTGGAGAAGCTGCAGCCAGATACAATTCAGCTCTTGACATGACGCTGAAGGTAAAGATTCAATACCTAAACTCTCGTCTTCTGATTAGTTCATTCCATATCTCTTTACTTCCTCATTCTCTTTGATTAACTCACAAAAACATGTTATATCGCAGGCCCTCTTGAGTATTAAGATTTTCAAAGAAGATTTGATGCAGAATAGTCAACAAATTCAAGACCAGCGGCAAGAACAAGTTCCTACTGCACTACAAAATTTATTTACTGCTGTTGTTTCAGAAGCGATTCAAGATGAGGGAGTCTACAGTTGCCTCTTGAGTGACTTTCTGACTTCCCAAGAAGAATTTCTTTCCATGGTTTGTGTGAAGAAATATGCTTCTAAGCATTATATTATTAATTGTTTTTGTCATAAGCTTAATTGTTAATCTAAAGGTATTCTAATTCTTACTCTTTGCAGTCGAGTGATGCTGCTAAGGTGGTTGTAGCCGTCCTTAATCTTTGGCGTTGTTGGAAAAATCCAGAAAGAGAAAGCTTGGTAACTCGCCTGTTTACGTTGGTGGAAAACAAAAGAATGAGTTGTAGAAAATGCAGAAGGATTACAAATTCTCCAGTGCAAAGTTCTTATGGCATTGTTATGGCTGCAGATTCGATCAGAGAACTGAAGGTATGTTTCATTTATTATCCTCTTTGTCATTCCTACAGAAACTGCAGGTACTTCCCCTTATATAGTTGTTCTGTGCTTAATATATGCAGTGTGCTTTTGGGAATATAAAGTTTGTGGATATCCTTAAGTTGATCCGCCTGGGATATAAAATGTTATGTGACAATAAAAAAGGAGGTTGTGGTAAGAAAAGCTATGTTGATCACATTATACGTAGATGCCCGCCTATCTTTACCATTGGTAAGCTTTGACCCCCTTGATTGTGATCTTTTGTACTCAATTTCATATATTATGCTTAATCATAAAGCAATGTTGGCGTTTTGTTGGTTTGCAATGTCAGTGTTGGAATGGGAGAAGAGTGAAACTGAGAAAGAAATATCTGAAACAACAAAGGCTTTGGACTGGGAGATAGATATCAGCAGGCTGTACGAAGAAGGCTTAGAAACAAACACTAACTACCGGCTTGTGTCAATGGTAAAACATCTGAAACATGGTCATATTTGTTTGTGCTATAGTTCTTCCGTTTTTCTTAGTTACAGTGTCAGAATATCTGGGATGTGATGCAGGTTGGTTGTGGTGAAGGAGAAGAAGAACACGTATGCCTAGCTTATGAAAAGAATCGGTGGGTCAATCTCAGACGTGAGTGTTTTGCAGGAGAG |