ncRNA ID | novel_gar_miR748 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:1946055-1946238 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAGUCGACUUGGGAACCGAUUGGC - 24 |
Stem-loop(if miRNA) |
-- A    AC               CGUA UG U     GA  GGUAAAA        GAU  GC      AUA   AC     G     AG   AAAA   C GUCG  UUGGGAACCGAUUGG    U  A CUAGU  GA       AAUUGAUU   CU  GAAUUU   UGG  UAGUU GACUG  CUA    A   | ||||  |||||||||||||||    |  | |||||  ||       ||||||||   ||  ||||||   |||  ||||| |||||  |||    U   G UAGC  GAUCCUUGGUUAACC    A  U GAUCA  CU       UUAGCUAA   GA  UUUAAA   AUC  GUCAA UUGAU  GGU    C UA C    AA               ---- GU U     AA  -------        AUU  --      --A   GA     G     CA   AUAU |
Stem-loop sequence | CAGUCGACUUGGGAACCGAUUGGCGUAUUGAUCUAGUGAGAGGUAAAAAAUUGAUUGAUCUGCGAAUUUAUAUGGACUAGUUGGACUGAGCUAAAAAAUCUAUAUGGACUAGUUGAACUGAGCUAAAAAUUUAGUUAAAUCGAUUUCAAACUAGUUUGACCAAUUGGUUCCUAGAACGAUCGAU |