ncRNA ID | novel_gar_miR733 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:65484380-65484552 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 150 - AAUAGGGCUUUAGCGGCGUUUUUU - 173 |
Stem-loop(if miRNA) |
--A   G      -    GC    UU   UA   -         -AAAUAGAGCAA                   A        AAAAC    AUA GGCUUU AGCG  GUUU  UGU  AAA CGCCGCUAA            UAGCGGCGUUUUACCAAAA CGCCGCUA     C    ||| |||||| ||||  ||||  |||  ||| |||||||||            ||||||||||||||||||| ||||||||    UAU CUGAAA UCGC  CAAA  AUA  UUU GCGGCGAUU            AUCGCCGCAAAAUGGUUUU GCGGCGAU     A UAA   A      A    UA    --   GC   C         ACGAGACCAAAA                   C        ACGAG |
Stem-loop sequence | AAUAGGGCUUUAGCGGCGUUUUUUGUUAAAACGCCGCUAAAAAUAGAGCAAUAGCGGCGUUUUACCAAAAACGCCGCUAAAAACCAGAGCAUAGCGGCGCUUUUGGUAAAACGCCGCUAAAAACCAGAGCAUUAGCGGCGCUUUCGAUAAAACAUCGCUAAAAGUCAUAUAAU |