ncRNA ID | novel_gar_miR727 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:45023559-45023742 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029586;SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACAGAAGAACUAGUUUACUCUUUG - 24 |
Stem-loop(if miRNA) |
--     C        CC            AA  A   U      C A           CAUG    -   CCAU    AAAUAAUG        U   AAGAG AAACUAGU  UUUCUGUUAAAA  UU UUU UUUCUA U UUAAAAACUGG    AUUG ACA    AACA        ACACGUGA G   ||||| ||||||||  ||||||||||||  || ||| |||||| | |||||||||||    |||| |||    ||||        ||||||||   UUCUC UUUGAUCA  GAAGACAAUUUU  AA AAG AAAGAU A AAUUUUUGAUC    UGAC UGU    UUGU        UGUGUACU U GU     A        -A            AA  A   U      U C           --AA    A   --AU    --ACUCCA        G |
Stem-loop sequence | AAGAGCAAACUAGUCCUUUCUGUUAAAAAAUUAUUUUUUUCUACUAUUAAAAACUGGCAUGAUUGACACCAUAACAAAAUAAUGACACGUGAUGUGUCAUGUGUACCUCAUGUUUAUGUACAGUAACUAGUUUUUAACAUUAGAAAUGAAAAAAAUUUUAACAGAAGAACUAGUUUACUCUUUG |