ncRNA ID | novel_gar_miR725 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:51978533-51978613 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029586;SRR3180719;SRR3180721;SRR1029587 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAAGUUGAUAGAUUUUGACGG - 21 |
Stem-loop(if miRNA) |
--A                 A       UAU   UAU  AU    UCAAAAUUUAUCAACUU ACAUGUU   UUC   CA  C    ||||||||||||||||| |||||||   |||   ||    AGUUUUAGAUAGUUGAA UGUACAA   AAG   GU  A GGC                 C       -CU   UUC  AU |
Stem-loop sequence | AUCAAAAUUUAUCAACUUAACAUGUUUAUUUCUAUCAAUCAUAUGCUUGAAUCAACAUGUCAAGUUGAUAGAUUUUGACGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017788797.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108484913 (LOC108484913), mRNA | uncharacterized LOC108484913(LOC108484913) | coding protein | psRNATarget |