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BaseInfo

ncRNA ID novel_gar_miR725
Species Gossypium arboreum
Class miRNA
Genome position Chr3:51978533-51978613 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029586;SRR3180719;SRR3180721;SRR1029587
Length 21
Mature sequence(if miRNA) 1 - CAAGUUGAUAGAUUUUGACGG - 21
Stem-loop(if miRNA) --A                 A       UAU   UAU  AU
   UCAAAAUUUAUCAACUU ACAUGUU   UUC   CA  C
   ||||||||||||||||| |||||||   |||   ||
   AGUUUUAGAUAGUUGAA UGUACAA   AAG   GU  A
GGC                 C       -CU   UUC  AU
Stem-loop sequence AUCAAAAUUUAUCAACUUAACAUGUUUAUUUCUAUCAAUCAUAUGCUUGAAUCAACAUGUCAAGUUGAUAGAUUUUGACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017788797.1
ncRNA:21   GGCAGUUUUAGAUAGUUGAAC   1
  **|*==|||||||||||||||
targets:428   AGGCUGAAAUCUAUCAACUUG   448

3.0 PREDICTED: Gossypium arboreum uncharacterized LOC108484913 (LOC108484913), mRNA uncharacterized LOC108484913(LOC108484913) coding protein psRNATarget