ncRNA ID | novel_gar_miR724 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:52285994-52286191 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 175 - CCAUUAAUUGUCGUUAACGGUGUA - 198 |
Stem-loop(if miRNA) |
-CCA                      ---CAAUA       A          ----CC             U    A       AUACAA        UAUAUUU     UUAAUUGUCGUUAACGGUGUAA        UGACGUG CACGUUAAAU      UUCAAACAAAAAA UUAG UUAAAUU      UUGGUUCC       U     ||||||||||||||||||||||        ||||||| ||||||||||      ||||||||||||| |||| |||||||      ||||||||     AAUUAACAGUAAUUGUCACAUU        AUUGUAC GUGCAAUUUA      AAGUUUGUUUUUU AAUC AAUUUAA      AAUCGAGG       U UCGC                      ACCAUUCG       C          UCAGUA             U    C       ------        UUUGCUU |
Stem-loop sequence | CCAUUAAUUGUCGUUAACGGUGUAACAAUAUGACGUGACACGUUAAAUCCUUCAAACAAAAAAUUUAGAUUAAAUUAUACAAUUGGUUCCUAUAUUUUUUUCGUUUGGAGCUAAAAUUUAACCUAAUUUUUUUGUUUGAAAUGACUAUUUAACGUGCCAUGUUAGCUUACCAUUACACUGUUAAUGACAAUUAACGCU |