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BaseInfo

ncRNA ID novel_gar_miR724
Species Gossypium arboreum
Class miRNA
Genome position Chr3:52285994-52286191 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 175 - CCAUUAAUUGUCGUUAACGGUGUA - 198
Stem-loop(if miRNA) -CCA                      ---CAAUA       A          ----CC             U    A       AUACAA        UAUAUUU
    UUAAUUGUCGUUAACGGUGUAA        UGACGUG CACGUUAAAU      UUCAAACAAAAAA UUAG UUAAAUU      UUGGUUCC       U
    ||||||||||||||||||||||        ||||||| ||||||||||      ||||||||||||| |||| |||||||      ||||||||
    AAUUAACAGUAAUUGUCACAUU        AUUGUAC GUGCAAUUUA      AAGUUUGUUUUUU AAUC AAUUUAA      AAUCGAGG       U
UCGC                      ACCAUUCG       C          UCAGUA             U    C       ------        UUUGCUU
Stem-loop sequence CCAUUAAUUGUCGUUAACGGUGUAACAAUAUGACGUGACACGUUAAAUCCUUCAAACAAAAAAUUUAGAUUAAAUUAUACAAUUGGUUCCUAUAUUUUUUUCGUUUGGAGCUAAAAUUUAACCUAAUUUUUUUGUUUGAAAUGACUAUUUAACGUGCCAUGUUAGCUUACCAUUACACUGUUAAUGACAAUUAACGCU