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BaseInfo

ncRNA ID	novel_gar_miR715
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr3:84303911-84304018 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588
Length	24
Mature sequence(if miRNA)	1 - AUACGACUUUUGUAGUAUGUAGCA - 24
Stem-loop(if miRNA)	--       -    U  C        U UG     AGUAAA   -CUAAG   AAAU   CUAUGUA UGCA GA UUGUAUAC U  AUGUA      AGC      UUC    A   ||||||| |||| || |||||||| |  |||||      |||      |||    G   GAUGUAU AUGU UU AGCAUAUG G  UGCGU      UCG      AAG    A AC       G    U  C        - GU     ----GG   AAAACA   AAAU
Stem-loop sequence	CUAUGUAUGCAUGACUUGUAUACUUUGAUGUAAGUAAAAGCCUAAGUUCAAAUAGAUAAAGAAACAAAAGCUGGUGCGUUGGGUAUACGACUUUUGUAGUAUGUAGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017786839.1	ncRNA:24   AC-GA----UGUAUGAUGUUUUCAGCAUA   1   ||-||----|||||*||||||||||*||| targets:577   UGACUUUUAACAUAAUACAAAAGUCAUAU   605 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum chloride channel protein CLC-d-like (LOC108483441), transcript variant X3, mRNA	chloride channel protein CLC-d-like(LOC108483441)	coding protein	psRNATarget
XM_017786840.1	ncRNA:24   AC-GA----UGUAUGAUGUUUUCAGCAUA   1   ||-||----|||||*||||||||||*||| targets:577   UGACUUUUAACAUAAUACAAAAGUCAUAU   605 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum chloride channel protein CLC-d-like (LOC108483441), transcript variant X4, mRNA	chloride channel protein CLC-d-like(LOC108483441)	coding protein	psRNATarget
XM_017786838.1	ncRNA:24   AC-GA----UGUAUGAUGUUUUCAGCAUA   1   ||-||----|||||*||||||||||*||| targets:577   UGACUUUUAACAUAAUACAAAAGUCAUAU   605 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum chloride channel protein CLC-d-like (LOC108483441), transcript variant X2, mRNA	chloride channel protein CLC-d-like(LOC108483441)	coding protein	psRNATarget
XM_017786841.1	ncRNA:24   AC-GA----UGUAUGAUGUUUUCAGCAUA   1   ||-||----|||||*||||||||||*||| targets:577   UGACUUUUAACAUAAUACAAAAGUCAUAU   605 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum chloride channel protein CLC-d-like (LOC108483441), transcript variant X5, mRNA	chloride channel protein CLC-d-like(LOC108483441)	coding protein	psRNATarget
XM_017786837.1	ncRNA:24   AC-GA----UGUAUGAUGUUUUCAGCAUA   1   ||-||----|||||*||||||||||*||| targets:577   UGACUUUUAACAUAAUACAAAAGUCAUAU   605 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum chloride channel protein CLC-d-like (LOC108483441), transcript variant X1, mRNA	chloride channel protein CLC-d-like(LOC108483441)	coding protein	psRNATarget