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BaseInfo

ncRNA ID ath_circ_029227
Species Arabidopsis thaliana
Class circRNA
Genome position 5:23116939-23117464[-]
Reference genome TAIR10
Source PlantcircBase
Method NA
Type intronic
Splice junction sequence AAGTTTGCAGTTTAAAGGTTGCTTCTGCTTTCGACAACCACGTGAAATATCAAGCAAGAAAAAAGCAATTTCTCCGGGATAAAAAAAAAGTAAGAAAAAAAAAACAGTAATTAAAATTTTTATTCGTAAGCTTTTCTCGAAATCCGAAACTCGTTTCGTAGTCGGTTGAAGAGAAAATCGAGACGAGAAACAAGTTCTAC
Tissues root
Exon boundary No-Yes
Splicing signals GT-CT
circRNA sequence NA
Genomic sequence AAGTTTGCAGTTTAAAGGTTGCTTCTGCTTTCGACAACCACGTGAAATATCAAGCAAGAAAAAAGCAATTTCTCCGGGATAAAAAAAAAGTAAGAAAAAAAAAAAAGATAAATATCTTCTTCGAAACAAAGTATCTTCTTCTCTCTGGGAAAAATCCAGAGTGCGACAAAACAGCCACAGATATTTTCTCAGATTTCTTCAAAAATCCTTGACATTAGCCTTAAATCACAACAATATCATGTAAAATCGGAAAAAAAAAAAAAAAAATCGATGAACGCGAAGTCACTCCTACCACGAGAAAAACGCTGTGAAACGGTTTACTCCAGTAGTAGTCAACAAAAATTCAAATTAGGTAAGACTAAAGAAGACGAAGAATAAGAACAACAGGAGACAAAGCGACCAACACTGCGAAATTTTAATTTAAACAAAACAGTAATTAAAATTTTTATTCGTAAGCTTTTCTCGAAATCCGAAACTCGTTTCGTAGTCGGTTGAAGAGAAAATCGAGACGAGAAACAAGTTCTAC