ncRNA ID | novel_gar_miR711 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:67310913-67311031 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CACUCUUGGCUCAAUGAACCAUG - 23 |
Stem-loop(if miRNA) |
--        G       A  A    C        ---------    ACAUAUGACCACCCAC   UGGUUCAU GAGCCGA AG GUCU GACCAUAU         GUGG                C   |||||||| ||||||| || |||| ||||||||         ||||   ACCAAGUA CUCGGUU UC CGGA CUGGUAUG         UCUG                A GU        A       C  A    A        UAGAUACCC    UGAGAUACAACGGACA |
Stem-loop sequence | UGGUUCAUGGAGCCGAAAGAGUCUCGACCAUAUGUGGACAUAUGACCACCCACCAACAGGCAACAUAGAGUGUCUCCCAUAGAUGUAUGGUCAAGGCACUCUUGGCUCAAUGAACCAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017774112.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108472566 (LOC108472566), mRNA | uncharacterized LOC108472566(LOC108472566) | coding protein | psRNATarget |