ncRNA ID | novel_gar_miR708 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:95657698-95657863 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 25 |
Mature sequence(if miRNA) | 142 - CUCUGUAGCGGCGGAGAGCAGAUCU - 166 |
Stem-loop(if miRNA) |
-AUUUG  G       A  G       -  -     GAAG  AGCA      G G       A  G       -  -      AAG       GC UCUCUGU GC ACGGAGA GC AGAUC    AU    GAUUUG C UCUCUGU GC ACGGAGA GU AGAUCU   A       || ||||||| || ||||||| || |||||    ||    |||||| | ||||||| || ||||||| || ||||||       CG AGAGGCG CG UGUCUCU CG UUUAG    UA    CUAGAU G AGAGGCG CG UGUCUCU CG UUUAGA   U UCUAGA  -       G  A       A  G     ACAA  GAAG      - -       G  A       G  G      CAA |
Stem-loop sequence | AUUUGGCGUCUCUGUAGCGACGGAGAGCAGAUCGAAGAUAGCAGAUUUGGCGUCUCUGUAGCGACGGAGAGUAGAUCUAAGAUAACAGAUUUGGCGUCUCUGUAGCGGCGGAGAGUAGAUCGAAGAUAACAGAUUUGGCAUCUCUGUAGCGGCGGAGAGCAGAUCU |