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BaseInfo

ncRNA ID novel_gar_miR708
Species Gossypium arboreum
Class miRNA
Genome position Chr3:95657698-95657863 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 25
Mature sequence(if miRNA) 142 - CUCUGUAGCGGCGGAGAGCAGAUCU - 166
Stem-loop(if miRNA) -AUUUG  G       A  G       -  -     GAAG  AGCA      G G       A  G       -  -      AAG
      GC UCUCUGU GC ACGGAGA GC AGAUC    AU    GAUUUG C UCUCUGU GC ACGGAGA GU AGAUCU   A
      || ||||||| || ||||||| || |||||    ||    |||||| | ||||||| || ||||||| || ||||||
      CG AGAGGCG CG UGUCUCU CG UUUAG    UA    CUAGAU G AGAGGCG CG UGUCUCU CG UUUAGA   U
UCUAGA  -       G  A       A  G     ACAA  GAAG      - -       G  A       G  G      CAA
Stem-loop sequence AUUUGGCGUCUCUGUAGCGACGGAGAGCAGAUCGAAGAUAGCAGAUUUGGCGUCUCUGUAGCGACGGAGAGUAGAUCUAAGAUAACAGAUUUGGCGUCUCUGUAGCGGCGGAGAGUAGAUCGAAGAUAACAGAUUUGGCAUCUCUGUAGCGGCGGAGAGCAGAUCU