ncRNA ID | novel_gar_miR707 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:45478222-45478353 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCCUGCGGGACUUUGGCCCAGAU - 24 |
Stem-loop(if miRNA) |
---AG        A     -  CCA  U    U   -   A     -        A    -A  CC   UA      CCUGCGGG CUUUG GC   GA AUAU UCC AGC CGAAG CCUGCGGG CUUU  GC  GGA  C      |||||||| ||||| ||   || |||| ||| ||| ||||| |||||||| ||||  ||  |||      GGGCGUCC GAAGC CG   CU UAUA AGG UCG GUUUC GGGCGUCC GAAG  CG  CCU  A UUUCA        -     A  -AC  U    U   C   -     A        -    CA  -A   UU |
Stem-loop sequence | AGCCUGCGGGACUUUGGCCCAGAUAUAUUUCCAGCACGAAGCCUGCGGGACUUUAGCCCGGAUACAUUUCCAGCACGAAGCCUGCGGGACUUUGGCUCGGAUAUAUUUCCAGCACGAAGCCUGCGGGACUUU |