ncRNA ID | novel_gar_miR687 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:29644107-29644177 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 21 |
Mature sequence(if miRNA) | 51 - UGACAUGGCAAAAGCGCUCCU - 71 |
Stem-loop(if miRNA) |
--          U        ---AU        CCA   GAGUGCUUUU CCAUGUCA     AAGCGUGU   C   |||||||||| ||||||||     ||||||||   CUCGCGAAAA GGUACAGU     UUUGCGCG   G UC          C        CGUAU        ACU |
Stem-loop sequence | GAGUGCUUUUUCCAUGUCAAUAAGCGUGUCCACGUCAGCGCGUUUUAUGCUGACAUGGCAAAAGCGCUCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017774937.1 |
|
3.0 | PREDICTED: Gossypium arboreum ABC transporter G family member 20-like (LOC108473402), mRNA | ABC transporter G family member 20-like(LOC108473402) | coding protein | psRNATarget |