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BaseInfo

ncRNA ID	ath-miRf11009-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GUGUUGGUGUCGAUCGACACCU - NA
Stem-loop(if miRNA)	UG                  -U   UU    C U        G    UAUCU  G CUGG  UUGGUGUCGAUCGACACC  CUG  GUGU G UCGACACC AUUG     GU U ||||  ||||||||||||||||||  |||  |||| | |||||||| ||||     || G GACC  AACCACAGCUGGCUGUGG  GAC  CACA C AGCUGUGG UAGC     CG C     CG                  UU   -C    A U        -    --UCU  U
Stem-loop sequence	CUGGUGUUGGUGUCGAUCGACACCUCUGUUGUGUCGUUCGACACCGAUUGUAUCUGUGUGCUGCUCUCGAUGGUGUCGAUCAACACCCAGUUGGUGUCGGUCGACACCAAGCCCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001202682.1	ncRNA:22   UCCACAGCUAGCUGUGGUUGUG   1   ***|||||*||||||||||||| targets:152   CUAUGUCGUUCGACACCAACAC   173 Target Full Sequence	1.0	Arabidopsis thaliana heme oxygenase 2 (HO2), mRNA	heme oxygenase 2(HO2)	coding protein	psRNATarget
NM_128212.3	ncRNA:22   UCCACAGCUAGCUGUGGUUGUG   1   ***|||||*||||||||||||| targets:152   CUAUGUCGUUCGACACCAACAC   173 Target Full Sequence	1.0	Arabidopsis thaliana heme oxygenase 2 (HO2), mRNA	heme oxygenase 2(HO2)	coding protein	psRNATarget
NM_001202681.2	ncRNA:22   UCCACAGCUAGCUGUGGUUGUG   1   ***|||||*||||||||||||| targets:282   CUAUGUCGUUCGACACCAACAC   303 Target Full Sequence	1.0	Arabidopsis thaliana heme oxygenase 2 (HO2), mRNA	heme oxygenase 2(HO2)	coding protein	psRNATarget
NM_001336075.1	ncRNA:22   UCCACAGCUAGCUGUGGUUGUG   1   ***|||||*||||||||||||| targets:282   CUAUGUCGUUCGACACCAACAC   303 Target Full Sequence	1.0	Arabidopsis thaliana heme oxygenase 2 (HO2), mRNA	heme oxygenase 2(HO2)	coding protein	psRNATarget
EF183308.1	ncRNA:22   UC-CACAGCUAGCUGUGGUUGUG   1   ||-||||||||||||||||*||= targets:1240   AGAGUGUCGAUCGACACCAUCAU   1262 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183309.1	ncRNA:22   UC-CACAGCUAGCUGUGGUUGUG   1   ||-||||||||||||||||*||= targets:1332   AGAGUGUCGAUCGACACCAUCAU   1354 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence	NA	coding protein	psRNATarget