ncRNA ID | novel_gar_miR682 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:17114686-17114793 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029586;SRR3180715;SRR3180719;SRR3180721;SRR1029587 |
Length | 21 |
Mature sequence(if miRNA) | 88 - UCGCUUCCCUAAUUUGGACGA - 108 |
Stem-loop(if miRNA) |
--UG      C   U       AGGU     CA  C  C     UU      UAGU     CCAAAU AGG AAGCGAA    GUUUG  GG AG AGAGU  UGAGGG    U     |||||| ||| |||||||    |||||  || || |||||  ||||||    U     GGUUUA UCC UUCGCUU    UAGAC  CC UC UCUCA  ACUCUC    U AGCA      A   C       --AU     --  -  A     CU      CUAC |
Stem-loop sequence | UGCCAAAUCAGGUAAGCGAAAGGUGUUUGCAGGCAGCAGAGUUUUGAGGGUAGUUUUCAUCCUCUCAUCACUCUACUCCCAGAUUAUUCGCUUCCCUAAUUUGGACGA |