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BaseInfo

ncRNA ID novel_gar_miR673
Species Gossypium arboreum
Class miRNA
Genome position Chr2:61523800-61523940 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - GCAAGUUUUUGAAGUGGCCUGUUA - 24
Stem-loop(if miRNA) --    A   ----        C    --      --    CAAA      -  --C        UUGAUUAUUAAAU     AG
  AUAG GUC    UAAAAACU UGCU  GAUAAU  GUAU    UGUUUU CU   UAAAAUUA             UGUUU  C
  |||| |||    |||||||| ||||  ||||||  ||||    |||||| ||   ||||||||             |||||
  UGUC CGG    GUUUUUGA ACGG  UUGUUA  CAUG    ACAGAA GA   AUUUUAGU             ACAAA  U
AU    -   UGAA        -    AG      AU    ---C      A  AAA        -------------     AU
Stem-loop sequence AUAGAGUCUAAAAACUCUGCUGAUAAUGUAUCAAAUGUUUUCUCUAAAAUUAUUGAUUAUUAAAUUGUUUAGCUUAAAACAUGAUUUUAAAAAGAAAGACACGUACUAAUUGUUGAGGCAAGUUUUUGAAGUGGCCUGUUA