ncRNA ID | novel_gar_miR673 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:61523800-61523940 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCAAGUUUUUGAAGUGGCCUGUUA - 24 |
Stem-loop(if miRNA) |
--    A   ----        C    --      --    CAAA      -  --C        UUGAUUAUUAAAU     AG   AUAG GUC    UAAAAACU UGCU  GAUAAU  GUAU    UGUUUU CU   UAAAAUUA             UGUUU  C   |||| |||    |||||||| ||||  ||||||  ||||    |||||| ||   ||||||||             |||||   UGUC CGG    GUUUUUGA ACGG  UUGUUA  CAUG    ACAGAA GA   AUUUUAGU             ACAAA  U AU    -   UGAA        -    AG      AU    ---C      A  AAA        -------------     AU |
Stem-loop sequence | AUAGAGUCUAAAAACUCUGCUGAUAAUGUAUCAAAUGUUUUCUCUAAAAUUAUUGAUUAUUAAAUUGUUUAGCUUAAAACAUGAUUUUAAAAAGAAAGACACGUACUAAUUGUUGAGGCAAGUUUUUGAAGUGGCCUGUUA |