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BaseInfo

ncRNA ID novel_gar_miR671
Species Gossypium arboreum
Class miRNA
Genome position Chr2:65484381-65484551 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR1029587
Length 23
Mature sequence(if miRNA) 149 - AUAGGGCUUUAGCGGCGUUUUUU - 171
Stem-loop(if miRNA) --AUAG      -    GC    UU   UA   -         -AAAUAGAGCAA                   A        AAAAC
      GGCUUU AGCG  GUUU  UGU  AAA CGCCGCUAA            UAGCGGCGUUUUACCAAAA CGCCGCUA     C
      |||||| ||||  ||||  |||  ||| |||||||||            ||||||||||||||||||| ||||||||
      CUGAAA UCGC  CAAA  AUA  UUU GCGGCGAUU            AUCGCCGCAAAAUGGUUUU GCGGCGAU     A
AAUAUA      A    UA    --   GC   C         ACGAGACCAAAA                   C        ACGAG
Stem-loop sequence AUAGGGCUUUAGCGGCGUUUUUUGUUAAAACGCCGCUAAAAAUAGAGCAAUAGCGGCGUUUUACCAAAAACGCCGCUAAAAACCAGAGCAUAGCGGCGCUUUUGGUAAAACGCCGCUAAAAACCAGAGCAUUAGCGGCGCUUUCGAUAAAACAUCGCUAAAAGUCAUAUAA