ncRNA ID | novel_gar_miR671 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:65484381-65484551 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR1029587 |
Length | 23 |
Mature sequence(if miRNA) | 149 - AUAGGGCUUUAGCGGCGUUUUUU - 171 |
Stem-loop(if miRNA) |
--AUAG      -    GC    UU   UA   -         -AAAUAGAGCAA                   A        AAAAC       GGCUUU AGCG  GUUU  UGU  AAA CGCCGCUAA            UAGCGGCGUUUUACCAAAA CGCCGCUA     C       |||||| ||||  ||||  |||  ||| |||||||||            ||||||||||||||||||| ||||||||       CUGAAA UCGC  CAAA  AUA  UUU GCGGCGAUU            AUCGCCGCAAAAUGGUUUU GCGGCGAU     A AAUAUA      A    UA    --   GC   C         ACGAGACCAAAA                   C        ACGAG |
Stem-loop sequence | AUAGGGCUUUAGCGGCGUUUUUUGUUAAAACGCCGCUAAAAAUAGAGCAAUAGCGGCGUUUUACCAAAAACGCCGCUAAAAACCAGAGCAUAGCGGCGCUUUUGGUAAAACGCCGCUAAAAACCAGAGCAUUAGCGGCGCUUUCGAUAAAACAUCGCUAAAAGUCAUAUAA |