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BaseInfo

ncRNA ID	novel_gar_miR670
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr2:67060884-67061027 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029588
Length	24
Mature sequence(if miRNA)	121 - AAGGUUUCACAGAGUUUGGAGCAC - 144
Stem-loop(if miRNA)	---AA  U    C         A   ---C           AA  A       G        UC     GGCUCA      GG UUCA AGAGUUUGG GCA    CUCGCCACCAA  AA UGUUUAG AUUUAGCU  GGUGG      A      || |||| ||||||||| |||    |||||||||||  || ||||||| ||||||||  |||||      CC AAGU UUUCAAAUC CGU    GAGUGGUGGUU  UU GCAAAUC UAAAUCGG  UCACC      A CUUUG  U    A         -   CACA           CC  A       G        -U     AUAUCU
Stem-loop sequence	AAGGUUUCACAGAGUUUGGAGCACCUCGCCACCAAAAAAAUGUUUAGGAUUUAGCUUCGGUGGGGCUCAAAUCUAUACCACUUGGCUAAAUGCUAAACGAUUCCUUGGUGGUGAGACACUGCCUAAACUUUAUGAAUCCGUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017750053.1	ncRNA:24   CACGAGGUUUGAGACACUUU-GGAA   1   ||||-|||||||||||||||-|||| targets:942   GUGC-CCAAACUCUGUGAAAUCCUU   965 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum transcription factor MYB24 (LOC108452278), transcript variant X3, mRNA	transcription factor MYB24(LOC108452278)	coding protein	psRNATarget
XM_017750052.1	ncRNA:24   CACGAGGUUUGAGACACUUU-GGAA   1   ||||-|||||||||||||||-|||| targets:974   GUGC-CCAAACUCUGUGAAAUCCUU   997 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum transcription factor MYB24 (LOC108452278), transcript variant X2, mRNA	transcription factor MYB24(LOC108452278)	coding protein	psRNATarget
XM_017750051.1	ncRNA:24   CACGAGGUUUGAGACACUUU-GGAA   1   ||||-|||||||||||||||-|||| targets:1121   GUGC-CCAAACUCUGUGAAAUCCUU   1144 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum transcription factor MYB24 (LOC108452278), transcript variant X1, mRNA	transcription factor MYB24(LOC108452278)	coding protein	psRNATarget