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BaseInfo

ncRNA ID novel_gar_miR665
Species Gossypium arboreum
Class miRNA
Genome position Chr2:97631018-97631163 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 1 - AAGGCCAUGACUUUUAGCGGCGUU - 24
Stem-loop(if miRNA) --    C                    --G G G    GU           C   AA               GUG
  AAGG CAUGACUUUUAGCGGCGUUU   U G AAAU  GCCGCUAAAGG CAU  UCUUUAGCGGCGUUU   G
  |||| ||||||||||||||||||||   | | ||||  ||||||||||| |||  |||||||||||||||
  UUCC GUACUGGAAAUCGCCGCGAA   G U UUUG  UGGCGAUUUCC GUA  GGAAAUCGCUGCGAA   U
AU    A                    AAA G G    --           A   CC               AAA
Stem-loop sequence AAGGCCAUGACUUUUAGCGGCGUUUGUGGGAAAUGUGCCGCUAAAGGCCAUAAUCUUUAGCGGCGUUUGUGGUAAAAAGCGUCGCUAAAGGCCAUGACCUUUAGCGGUGUUUGUGGAAAAAGCGCCGCUAAAGGUCAUGACCUUUA