ncRNA ID | novel_gar_miR663 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:96914442-96914499 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 35 - ACGACAAUGAGCAAAGAGGGGCAU - 58 |
Stem-loop(if miRNA) |
--            G  U   -  C   UC   GCCUUUCUUUGU UC UUG CG UAU  C   |||||||||||| || ||| || |||  C   CGGGGAGAAACG AG AAC GC AUA  A UA            -  U   A  -   UU |
Stem-loop sequence | GCCUUUCUUUGUGUCUUUGCGCUAUUCCCAUUAUACGACAAUGAGCAAAGAGGGGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017769201.1 |
|
1.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108468313 (LOC108468313), mRNA | uncharacterized LOC108468313(LOC108468313) | coding protein | psRNATarget |