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BaseInfo

ncRNA ID novel_gar_miR663
Species Gossypium arboreum
Class miRNA
Genome position Chr2:96914442-96914499 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588
Length 24
Mature sequence(if miRNA) 35 - ACGACAAUGAGCAAAGAGGGGCAU - 58
Stem-loop(if miRNA) --            G  U   -  C   UC
  GCCUUUCUUUGU UC UUG CG UAU  C
  |||||||||||| || ||| || |||  C
  CGGGGAGAAACG AG AAC GC AUA  A
UA            -  U   A  -   UU
Stem-loop sequence GCCUUUCUUUGUGUCUUUGCGCUAUUCCCAUUAUACGACAAUGAGCAAAGAGGGGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017769201.1
ncRNA:24   UACGGGGAGAAACGAGUAACAGCA   1
  =|||||||||||||||||||*|||
targets:673   GUGCCCCUCUUUGCUCAUUGACGU   696

1.5 PREDICTED: Gossypium arboreum uncharacterized LOC108468313 (LOC108468313), mRNA uncharacterized LOC108468313(LOC108468313) coding protein psRNATarget