Search result

BaseInfo

ncRNA ID ath_circ_028734
Species Arabidopsis thaliana
Class circRNA
Genome position 5:21311809-21312616[+]
Reference genome TAIR10
Source PlantcircBase
Method find_circ
Type exonic
Splice junction sequence TTTATACCATACTCGTTTATTGAGAAAGAAGCTTCACACGTTGAGGGATTTAGTCCTGAACTAGCTCTTGTTACTGTTGGAGGAGGAAAAGAACTTGAGGAACCTATACTATTGAGGCTATGATGGGAGATCGGAAGGCTTTGCAGGCTGGTACTAGCCACAATTTAGGCCAGAACTTTTCTCGTGCCTTTGGAACTCAG
Tissues leaf
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence TTTATACCATACTCGTTTATTGAGAAAGAAGCTTCACACGTTGAGGGATTTAGTCCTGAACTAGCTCTTGTTACTGTTGGAGGAGGAAAAGAACTTGAGGAGAAACTTGTGGTAGGCATTTTTCTGGCGTTATTATGTTTTACCACAAAGCTAGAATTGTGAAAATTCTTTGCCTAAGGTTTTGGGTTTGATTGTTGCACTTGTTGAGGTTGTGGCAGGTTCGGCCTACTAGTGAAACCATAGTGAATCATATGTTTACCCAGTGGATTCACAGCTATCGTGATCTTCCTCTCATGATTAATCAGGTCTGGACAGACATTCAATTGTTTATCATTCTTTGTATGAAAAATCTGGTATTTATGACTGTTCCTGGTTATGTTTTTCTTCTTTCTGCGATTTAGTGGGCCAATGTCACTAGATGGGAAATGCGGACGAAACCATTTATTAGGACTCTTGAATTTCTATGGCAAGAGGGTCATACTGCTCATGCCACTCCTGAGGAGGCAGAAAAGGAGGTTTGTTCTCTATAGAGCTGTGGTCAACTTGTGGAGATTTTTTTTGTGGTACTCTCCTGTGACAAATGATTAGTTTTGTATTGCAGGCGAAACAGATGATCGAGATCTACACCAGATTTGCTTTTGAGCAAACTGCAATTCCTGTTATTCCAGGTCGAAAATCAAAGTTAGAGACTTTTGCTGGTGCTGATATAACCTATACTATTGAGGCTATGATGGGAGATCGGAAGGCTTTGCAGGCTGGTACTAGCCACAATTTAGGCCAGAACTTTTCTCGTGCCTTTGGAACTCAG