| ncRNA ID | novel_gar_miR661 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:66150302-66150411 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029588;SRR1029587 |
| Length | 20 |
| Mature sequence(if miRNA) | 91 - CUCAAGAAAGCUGUGGGAAA - 110 |
| Stem-loop(if miRNA) |
-- A UU A ACUAA CCGUCCUAAGGGAGAAAGA UUCCACAGCUUUCUUGA CUUUC UG GU CU A ||||||||||||||||| ||||| || || || AGGGUGUCGAAAGAACU GAAGG AC CA AC A AA C -U - ----C GAUCGUUUACCAAAAAAAA |
| Stem-loop sequence | UUCCACAGCUUUCUUGAACUUUCUUUGAGUACUAACUCCGUCCUAAGGGAGAAAGAAAAAAAAAAACCAUUUGCUAGCACACCAUGGAAGCUCAAGAAAGCUGUGGGAAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017758168.1 |
|
3.0 | PREDICTED: Gossypium arboreum G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 (LOC108458771), mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1(LOC108458771) | coding protein | psRNATarget | |||||||||
| XM_017757560.1 |
|
3.0 | PREDICTED: Gossypium arboreum G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 (LOC108458244), mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1(LOC108458244) | coding protein | psRNATarget |