ncRNA ID | novel_gar_miR660 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:66053670-66053748 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029588;SRR3180715;SRR3180720;SRR3180721;SRR1029587 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CGAUGUUGGUGCGGUUCAAUC - 21 |
Stem-loop(if miRNA) |
--C                    C  AAA  -AA     A    GAUGUUGGUGCGGUUCAAUC GA   CG   UUUAC A    |||||||||||||||||||| ||   ||   |||||    CUAUAACCGCGCCGAGUUAG CU   GC   AAAUG U UCA                    A  AUA  AUA     C |
Stem-loop sequence | CGAUGUUGGUGCGGUUCAAUCCGAAAACGAAUUUACAAUCGUAAAAUACGAUAUCAGAUUGAGCCGCGCCAAUAUCACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017788696.1 |
|
2.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108484796 (LOC108484796), mRNA | uncharacterized LOC108484796(LOC108484796) | coding protein | psRNATarget |