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BaseInfo

ncRNA ID novel_gar_miR660
Species Gossypium arboreum
Class miRNA
Genome position Chr1:66053670-66053748 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029588;SRR3180715;SRR3180720;SRR3180721;SRR1029587
Length 21
Mature sequence(if miRNA) 1 - CGAUGUUGGUGCGGUUCAAUC - 21
Stem-loop(if miRNA) --C                    C  AAA  -AA     A
   GAUGUUGGUGCGGUUCAAUC GA   CG   UUUAC A
   |||||||||||||||||||| ||   ||   |||||
   CUAUAACCGCGCCGAGUUAG CU   GC   AAAUG U
UCA                    A  AUA  AUA     C
Stem-loop sequence CGAUGUUGGUGCGGUUCAAUCCGAAAACGAAUUUACAAUCGUAAAAUACGAUAUCAGAUUGAGCCGCGCCAAUAUCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017788696.1
ncRNA:21   CUAACUUGGCGUGGUUGUAGC   1
  ||||*|||||||||||||||*
targets:2066   GAUUUAACCGCACCAACAUCA   2086

2.0 PREDICTED: Gossypium arboreum uncharacterized LOC108484796 (LOC108484796), mRNA uncharacterized LOC108484796(LOC108484796) coding protein psRNATarget